Definition | Escherichia coli 55989, complete genome. |
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Accession | NC_011748 |
Length | 5,154,862 |
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The map label for this gene is 218698157
Identifier: 218698157
GI number: 218698157
Start: 5064567
End: 5064968
Strand: Direct
Name: 218698157
Synonym: EC55989_4978
Alternate gene names: NA
Gene position: 5064567-5064968 (Clockwise)
Preceding gene: 218698148
Following gene: 218698158
Centisome position: 98.25
GC content: 55.47
Gene sequence:
>402_bases GTGCGGAAGCATCTTTTCGCAACAACCACCCGGTATACCGGTACGGCTCAGCCACCGCAACCTCCCCGTTTATCTCCTGG CGGTCACATTCCCGATTATTTTTTACGTTTCTCCCCGGTTGTTATGCCGGTGAAGGTGGCGCGCTGTTTTCATGACCACA CCGGCTGGTTTAACAACATCCGGAGGAACATTCTCATGGCTACCCCAGTTTCACTGATGGATGACCAGATGGTCGACATG GCATTTATCACTCAACTGACCGGCCTGACAGATAAGTGGTTTTACAGGCTCATCAGGGATGGGGCCTTTCCGGCTCCCAT CAAGCTGGGCCGCAGCTCCCGCTGGCTGAAAAGTGAAGTGGAAGCCTGGCTGCAGGCGCGTATTGCACAGCCCCGCCCGT AA
Upstream 100 bases:
>100_bases TGACTCACTGTAACCACCACCGAAAACAACTCTGCAATTATCAGAACGCCTGCTTCTCTCCCTGTCCTCACGAAAACTAT CCCCTCTTTATCGCGCGTGC
Downstream 100 bases:
>100_bases TTTCTGACCGTTATCCGTTCACCCGCAGCAGACGTAATCCCCGGCCTGCCGGCGGCATTCTGCTGCCTGTTATATCCCCG TGAGGAATATGAAAATGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Regulatory Protein; Phage-Regulatory Protein; Phage Regulatory Protein; AlpA Family Protein
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MRKHLFATTTRYTGTAQPPQPPRLSPGGHIPDYFLRFSPVVMPVKVARCFHDHTGWFNNIRRNILMATPVSLMDDQMVDM AFITQLTGLTDKWFYRLIRDGAFPAPIKLGRSSRWLKSEVEAWLQARIAQPRP
Sequences:
>Translated_133_residues MRKHLFATTTRYTGTAQPPQPPRLSPGGHIPDYFLRFSPVVMPVKVARCFHDHTGWFNNIRRNILMATPVSLMDDQMVDM AFITQLTGLTDKWFYRLIRDGAFPAPIKLGRSSRWLKSEVEAWLQARIAQPRP >Mature_133_residues MRKHLFATTTRYTGTAQPPQPPRLSPGGHIPDYFLRFSPVVMPVKVARCFHDHTGWFNNIRRNILMATPVSLMDDQMVDM AFITQLTGLTDKWFYRLIRDGAFPAPIKLGRSSRWLKSEVEAWLQARIAQPRP
Specific function: Unknown
COG id: COG3311
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15352; Mature: 15352
Theoretical pI: Translated: 11.21; Mature: 11.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKHLFATTTRYTGTAQPPQPPRLSPGGHIPDYFLRFSPVVMPVKVARCFHDHTGWFNNI CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCHHHHHH RRNILMATPVSLMDDQMVDMAFITQLTGLTDKWFYRLIRDGAFPAPIKLGRSSRWLKSEV HHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEECCCCCHHHHHHH EAWLQARIAQPRP HHHHHHHCCCCCC >Mature Secondary Structure MRKHLFATTTRYTGTAQPPQPPRLSPGGHIPDYFLRFSPVVMPVKVARCFHDHTGWFNNI CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCHHHHHH RRNILMATPVSLMDDQMVDMAFITQLTGLTDKWFYRLIRDGAFPAPIKLGRSSRWLKSEV HHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEECCCCCHHHHHHH EAWLQARIAQPRP HHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA