Definition | Escherichia coli 55989, complete genome. |
---|---|
Accession | NC_011748 |
Length | 5,154,862 |
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The map label for this gene is insN1 [H]
Identifier: 218698136
GI number: 218698136
Start: 5043497
End: 5043841
Strand: Direct
Name: insN1 [H]
Synonym: EC55989_4953
Alternate gene names: 218698136
Gene position: 5043497-5043841 (Clockwise)
Preceding gene: 218698127
Following gene: 218698137
Centisome position: 97.84
GC content: 45.8
Gene sequence:
>345_bases TTGAGGTGGCACACTAAATTTAGCTACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCCATAATGAAAA AAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAAATACACCGTGGCAGATGCAGCCA GCGCTATGGATGTCGGCCTTTCCACAATGACGCGATGGGTGAAACAATTACGTGATGAGCGGCAGGGAAAAACACCAAAA GCCTCCCCCATTACCCCGGAACAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAAT ATTAAAAAGGCTACCGCGCTCTTGA
Upstream 100 bases:
>100_bases TAATAAAGGTGGTGAACTTTATATACTACTAAATCAAACATCAACAATTTATAAACAATAATATATTATCATATCTTTTA AAAACGGCTCACTAAGAACC
Downstream 100 bases:
>100_bases TGTCAGACTCCCTGAACAGTTTTCGATAATCGGGAAACTCAGGGCGCGTTATCCTGTGGCCACTCTCTGCCATGTGTTCG GGGTCCATCGCAGCAGCTAC
Product: transposase ORF A, IS911
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MRWHTKFSYLNRGDMLTSEQHRCHNEKRNFSAEFKRESAQLVVDQKYTVADAASAMDVGLSTMTRWVKQLRDERQGKTPK ASPITPEQIEIRELRKKLQRIEMENEILKRLPRS
Sequences:
>Translated_114_residues MRWHTKFSYLNRGDMLTSEQHRCHNEKRNFSAEFKRESAQLVVDQKYTVADAASAMDVGLSTMTRWVKQLRDERQGKTPK ASPITPEQIEIRELRKKLQRIEMENEILKRLPRS >Mature_114_residues MRWHTKFSYLNRGDMLTSEQHRCHNEKRNFSAEFKRESAQLVVDQKYTVADAASAMDVGLSTMTRWVKQLRDERQGKTPK ASPITPEQIEIRELRKKLQRIEMENEILKRLPRS
Specific function: Involved in the transposition of the insertion sequence IS911 [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 13532; Mature: 13532
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWHTKFSYLNRGDMLTSEQHRCHNEKRNFSAEFKRESAQLVVDQKYTVADAASAMDVGL CCCCCCHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH STMTRWVKQLRDERQGKTPKASPITPEQIEIRELRKKLQRIEMENEILKRLPRS HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRWHTKFSYLNRGDMLTSEQHRCHNEKRNFSAEFKRESAQLVVDQKYTVADAASAMDVGL CCCCCCHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH STMTRWVKQLRDERQGKTPKASPITPEQIEIRELRKKLQRIEMENEILKRLPRS HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]