Definition | Escherichia coli 55989, complete genome. |
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Accession | NC_011748 |
Length | 5,154,862 |
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The map label for this gene is 218698087
Identifier: 218698087
GI number: 218698087
Start: 5003258
End: 5003827
Strand: Direct
Name: 218698087
Synonym: EC55989_4897
Alternate gene names: NA
Gene position: 5003258-5003827 (Clockwise)
Preceding gene: 218698086
Following gene: 218698088
Centisome position: 97.06
GC content: 51.93
Gene sequence:
>570_bases GTGTTGTTGATGAATCTGACCGGACATCAGCAGAGCGCACGCCACCATCTGCGGCCCTTACCGGCATACGCTGCAGTACC GCACATATCACGGAAACGGACAATGCCTGGTTGTACTCGCTGTCAAATCAGACGAATGACACCGGCGAATCAGAATGGAT TCATTTCACAGGTAGCGGATATCTGTTACGTACCGATGCGTGGTCATACCCGGTTCTGCGGCTTAAACGCCTGGGGCTGT CCAGAACGTTCCGCCGTCTGGTTGTCACACTCATCCGGCGTTATGGCGTCAGTCTCATTCATCTGGATGCCGGTGCTGAA TGTCTGCAGGATTTACCCACTTTCAACTGGTAACCAGGACAAAAGACACAGGATGAAATCATTAACCACAGAAACGGCGC TGGATATTCTGATTGTGTGGCTGCAGGACAATATCGACTGCGAATCGGGAATTATCTTTGACAACGATGAGGATAAAACG GATTCGGCAGCACTGTTGCCCTGTATCGAACAGGCCAGGGAGGGTATCCGTACCCTGCGCCAACTGCAGCTTCTGCACCA GAACCGATAA
Upstream 100 bases:
>100_bases AACGTGCAGGCACTGAACATGGGGCGCATTGTCGTTGACGTCGATGGTGTTACTCTCGCTGAACTGATTAACGTGGTCTG CGATAACGGTTACTCCCTTC
Downstream 100 bases:
>100_bases ATATTACTCACCATACTTCATTCCACTGACGCCAGCCTGAACAGGGCTGGCGTTTTCATTTATCTGCAAAAAGGAATATC AATTATGTCTGAAATCACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MLLMNLTGHQQSARHHLRPLPAYAAVPHISRKRTMPGCTRCQIRRMTPANQNGFISQVADICYVPMRGHTRFCGLNAWGC PERSAVWLSHSSGVMASVSFIWMPVLNVCRIYPLSTGNQDKRHRMKSLTTETALDILIVWLQDNIDCESGIIFDNDEDKT DSAALLPCIEQAREGIRTLRQLQLLHQNR
Sequences:
>Translated_189_residues MLLMNLTGHQQSARHHLRPLPAYAAVPHISRKRTMPGCTRCQIRRMTPANQNGFISQVADICYVPMRGHTRFCGLNAWGC PERSAVWLSHSSGVMASVSFIWMPVLNVCRIYPLSTGNQDKRHRMKSLTTETALDILIVWLQDNIDCESGIIFDNDEDKT DSAALLPCIEQAREGIRTLRQLQLLHQNR >Mature_189_residues MLLMNLTGHQQSARHHLRPLPAYAAVPHISRKRTMPGCTRCQIRRMTPANQNGFISQVADICYVPMRGHTRFCGLNAWGC PERSAVWLSHSSGVMASVSFIWMPVLNVCRIYPLSTGNQDKRHRMKSLTTETALDILIVWLQDNIDCESGIIFDNDEDKT DSAALLPCIEQAREGIRTLRQLQLLHQNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21451; Mature: 21451
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLMNLTGHQQSARHHLRPLPAYAAVPHISRKRTMPGCTRCQIRRMTPANQNGFISQVAD CEEEECCCCHHHHHHHCCCCCHHHHCCCCHHHCCCCCCCCEEEEECCCCCCCCHHHHHHH ICYVPMRGHTRFCGLNAWGCPERSAVWLSHSSGVMASVSFIWMPVLNVCRIYPLSTGNQD HHCCCCCCCCEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHEECCCCCCHH KRHRMKSLTTETALDILIVWLQDNIDCESGIIFDNDEDKTDSAALLPCIEQAREGIRTLR HHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHH QLQLLHQNR HHHHHHCCC >Mature Secondary Structure MLLMNLTGHQQSARHHLRPLPAYAAVPHISRKRTMPGCTRCQIRRMTPANQNGFISQVAD CEEEECCCCHHHHHHHCCCCCHHHHCCCCHHHCCCCCCCCEEEEECCCCCCCCHHHHHHH ICYVPMRGHTRFCGLNAWGCPERSAVWLSHSSGVMASVSFIWMPVLNVCRIYPLSTGNQD HHCCCCCCCCEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHEECCCCCCHH KRHRMKSLTTETALDILIVWLQDNIDCESGIIFDNDEDKTDSAALLPCIEQAREGIRTLR HHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHH QLQLLHQNR HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA