Definition | Escherichia coli 55989, complete genome. |
---|---|
Accession | NC_011748 |
Length | 5,154,862 |
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The map label for this gene is yeeV [H]
Identifier: 218698085
GI number: 218698085
Start: 5002607
End: 5003125
Strand: Direct
Name: yeeV [H]
Synonym: EC55989_4895
Alternate gene names: 218698085
Gene position: 5002607-5003125 (Clockwise)
Preceding gene: 218698084
Following gene: 218698086
Centisome position: 97.05
GC content: 50.48
Gene sequence:
>519_bases TTGTGGCTACGTTTATATGGCTGTTTATCCGACGCCCGAAACGAAAAAGTAACTCTCCAGAATAACCTTCTTCTCCGGCC TGGTGCTTTCACCACGCCACTTTTCCATTTTTCATCTCTGCATATCAGGAAAATCTTCAGTATGAACACATTACCCGATA CACACGTACGGGAGGCATCGCATTGCCAGTCTCCCGTCACCATCTGGCAGACACTGCTCACCCGACTGCTGGACCAGCAT TACGGCCTCACACTGAATGACACACCGTTCGCTGATGAACGTGTGATTGAGCAGCATATTGAGGCAGGCATTTCACTGTG TGATGCGGTGAACTTTCTCGTTGAAAAATACGCACTGGTGCGTACCGACCAGCCGGGATTCAGCGCCTGTACTCGTTCTC AGTTAATAAACAGTATTGATATCCTCCGGGCCCGCCGGGCAACCGGCCTGATGGCCCGCGACAATTACAGAACGGTAAAT AACATTACCCTGGGTAAACATCCGGGGGCGAAACAATGA
Upstream 100 bases:
>100_bases TGGAACTCATGCTCACCAGCGGTGAACTGAATCCCCGCCATCAGCATACCGTCACGCTGTATGCAAAAAGGCTGACCTGC GAAGCCGACACCCTCGGCAG
Downstream 100 bases:
>100_bases AACTGGCCCTGACGCTGGAAGCCGACAGCATTAACGTGCAGGCACTGAACATGGGGCGCATTGTCGTTGACGTCGATGGT GTTACTCTCGCTGAACTGAT
Product: conserved hypothetical protein of phage origin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MWLRLYGCLSDARNEKVTLQNNLLLRPGAFTTPLFHFSSLHIRKIFSMNTLPDTHVREASHCQSPVTIWQTLLTRLLDQH YGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGFSACTRSQLINSIDILRARRATGLMARDNYRTVN NITLGKHPGAKQ
Sequences:
>Translated_172_residues MWLRLYGCLSDARNEKVTLQNNLLLRPGAFTTPLFHFSSLHIRKIFSMNTLPDTHVREASHCQSPVTIWQTLLTRLLDQH YGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGFSACTRSQLINSIDILRARRATGLMARDNYRTVN NITLGKHPGAKQ >Mature_172_residues MWLRLYGCLSDARNEKVTLQNNLLLRPGAFTTPLFHFSSLHIRKIFSMNTLPDTHVREASHCQSPVTIWQTLLTRLLDQH YGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGFSACTRSQLINSIDILRARRATGLMARDNYRTVN NITLGKHPGAKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli ypjF and ykfI [H]
Homologues:
Organism=Escherichia coli, GI1788315, Length=124, Percent_Identity=87.0967741935484, Blast_Score=220, Evalue=4e-59, Organism=Escherichia coli, GI1788999, Length=104, Percent_Identity=67.3076923076923, Blast_Score=146, Evalue=9e-37, Organism=Escherichia coli, GI1786439, Length=110, Percent_Identity=60.9090909090909, Blast_Score=136, Evalue=6e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009610 [H]
Pfam domain/function: PF06755 DUF1219 [H]
EC number: NA
Molecular weight: Translated: 19548; Mature: 19548
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWLRLYGCLSDARNEKVTLQNNLLLRPGAFTTPLFHFSSLHIRKIFSMNTLPDTHVREAS CEEEEEEHHHHCCCCEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH HCQSPVTIWQTLLTRLLDQHYGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALV HCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTDQPGFSACTRSQLINSIDILRARRATGLMARDNYRTVNNITLGKHPGAKQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCEEECCCCCCCC >Mature Secondary Structure MWLRLYGCLSDARNEKVTLQNNLLLRPGAFTTPLFHFSSLHIRKIFSMNTLPDTHVREAS CEEEEEEHHHHCCCCEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH HCQSPVTIWQTLLTRLLDQHYGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALV HCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTDQPGFSACTRSQLINSIDILRARRATGLMARDNYRTVNNITLGKHPGAKQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]