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The map label for this gene is ykfF [C]

Identifier: 218698079

GI number: 218698079

Start: 4999693

End: 4999926

Strand: Direct

Name: ykfF [C]

Synonym: EC55989_4889

Alternate gene names: 218698079

Gene position: 4999693-4999926 (Clockwise)

Preceding gene: 218698078

Following gene: 218698080

Centisome position: 96.99

GC content: 52.56

Gene sequence:

>234_bases
ATGTCGGACTGCCACCCTGTTTTATTGCCCGAAGGCCCTTTCTCACGCGAACAGGCGGTTGCCGTCACAACAGCTTACCG
CAATGTGCTTATTGAAGATGACCAGGGAACGCATTTCCGGCTGGTTATCCGCAATGCCGAAGGGCAGCTACGCTGGCGGT
GCTGGAATTTTGAACCTGATGCCGGAAAACAGCTAAATTCGTATCTCGCCAGTGAGGGAATTCTCAGGCAATAA

Upstream 100 bases:

>100_bases
TCAATCCTGAAGACCGTGCGTACGACAAAGTGACCGTCACGGTTGGTGCTGACGGTAATGCCACCGGCGCCAGCGTTGAA
TTTATCGGAAAATAGCCGGT

Downstream 100 bases:

>100_bases
ACGTCTTCATTTCATCCATCAGGCCGCATCTTCTCCGGGAGACGCGGCCTTTTCGTTTATACCGCTAATTCATTCATAAG
GAGCAAAGTATGCAATTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 76

Protein sequence:

>77_residues
MSDCHPVLLPEGPFSREQAVAVTTAYRNVLIEDDQGTHFRLVIRNAEGQLRWRCWNFEPDAGKQLNSYLASEGILRQ

Sequences:

>Translated_77_residues
MSDCHPVLLPEGPFSREQAVAVTTAYRNVLIEDDQGTHFRLVIRNAEGQLRWRCWNFEPDAGKQLNSYLASEGILRQ
>Mature_76_residues
SDCHPVLLPEGPFSREQAVAVTTAYRNVLIEDDQGTHFRLVIRNAEGQLRWRCWNFEPDAGKQLNSYLASEGILRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0401 family

Homologues:

Organism=Escherichia coli, GI1786443, Length=71, Percent_Identity=61.9718309859155, Blast_Score=104, Evalue=9e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3853_ECOL5 (Q0TB55)

Other databases:

- EMBL:   CP000247
- RefSeq:   YP_671725.1
- ProteinModelPortal:   Q0TB55
- SMR:   Q0TB55
- STRING:   Q0TB55
- EnsemblBacteria:   EBESCT00000047283
- GeneID:   4188426
- GenomeReviews:   CP000247_GR
- KEGG:   ecp:ECP_3853
- eggNOG:   NOG145762
- GeneTree:   EBGT00050000009813
- HOGENOM:   HBG471076
- OMA:   YANIAIE
- PhylomeDB:   Q0TB55
- ProtClustDB:   CLSK908318
- BioCyc:   ECOL362663:ECP_3853-MONOMER
- InterPro:   IPR009253
- ProDom:   PD028015

Pfam domain/function: PF06006 DUF905

EC number: NA

Molecular weight: Translated: 8816; Mature: 8685

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDCHPVLLPEGPFSREQAVAVTTAYRNVLIEDDQGTHFRLVIRNAEGQLRWRCWNFEPD
CCCCCCEEECCCCCCCCCEEEEEEEECEEEEECCCCCEEEEEEECCCCEEEEEEECCCCC
AGKQLNSYLASEGILRQ
CCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SDCHPVLLPEGPFSREQAVAVTTAYRNVLIEDDQGTHFRLVIRNAEGQLRWRCWNFEPD
CCCCCEEECCCCCCCCCEEEEEEEECEEEEECCCCCEEEEEEECCCCEEEEEEECCCCC
AGKQLNSYLASEGILRQ
CCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA