Definition | Escherichia coli 55989, complete genome. |
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Accession | NC_011748 |
Length | 5,154,862 |
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The map label for this gene is 218698062
Identifier: 218698062
GI number: 218698062
Start: 4986234
End: 4986908
Strand: Direct
Name: 218698062
Synonym: EC55989_4872
Alternate gene names: NA
Gene position: 4986234-4986908 (Clockwise)
Preceding gene: 218698061
Following gene: 218698065
Centisome position: 96.73
GC content: 33.48
Gene sequence:
>675_bases ATGGAGTGGAAGAAAGAGCTTAGAGCAAAGTTTGAAAGAGACGAACTTAGAAGATTAATTTCTAATGTAAACTGGATTAT ATTCAAACCTAAAATAAAAAAGCAATTAGAAATACTATCAACCCAATTATCAGGAGAGCATGTAAGATTTAATATAATTG ATATGCAAGATGAACCAGATGGTTATGGTTTTGATTGCCTGACATTTCAGATCGCTGATCGTATGACTGGAAATATGCGG CAGGAAAAAACTACCGAAAGCATAAAGTTTAATCATCATTGGCAAAAAGGAGCCGCACTTTCAATTACATATAGTGCGAC GGGGGCTGTGCATATAATTCTTTTTCCGTCTACTTCAGATGATTCATTAGCAACACATGATTCCTTGATTGTCCATCATT CATATAACGTTAAACACATAACACCAAAAAAAATAGAGAAAGCAGTAAAGAATTTACTTCATTATCACCGTGTTACAGGT GTTTTACACAAGGCCGCATTAAAAGATTTAATTTTAATCCGCTTACTGAAAATTAAGATGTTTTTTATTCAGTATAACGA CAAAGAGAACAAGTTTAGAAGAGTTACAGCATTATATATACCTACATTAAGTCTTATAGTTTCGTTGGCTGCCGCAGTAG CATCTATTCTGGCATTAGTATCTGTTAAATCATGA
Upstream 100 bases:
>100_bases ACATACATATACTATTGATTATCGACCTAGGGTAAGTTTATCAATTATGGTACGATAGAATCTAAATAATCTATAGTAGC AAGAGGCTTAGGGGGAGATA
Downstream 100 bases:
>100_bases TGATTATAAGCCAGCAACTAACTGGCTTATAAATTAGAAATTGGAAACTATCTCTTCTCACAAAACTGCTATCTTTAGCG ATAAGGGAATGTAATCTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MEWKKELRAKFERDELRRLISNVNWIIFKPKIKKQLEILSTQLSGEHVRFNIIDMQDEPDGYGFDCLTFQIADRMTGNMR QEKTTESIKFNHHWQKGAALSITYSATGAVHIILFPSTSDDSLATHDSLIVHHSYNVKHITPKKIEKAVKNLLHYHRVTG VLHKAALKDLILIRLLKIKMFFIQYNDKENKFRRVTALYIPTLSLIVSLAAAVASILALVSVKS
Sequences:
>Translated_224_residues MEWKKELRAKFERDELRRLISNVNWIIFKPKIKKQLEILSTQLSGEHVRFNIIDMQDEPDGYGFDCLTFQIADRMTGNMR QEKTTESIKFNHHWQKGAALSITYSATGAVHIILFPSTSDDSLATHDSLIVHHSYNVKHITPKKIEKAVKNLLHYHRVTG VLHKAALKDLILIRLLKIKMFFIQYNDKENKFRRVTALYIPTLSLIVSLAAAVASILALVSVKS >Mature_224_residues MEWKKELRAKFERDELRRLISNVNWIIFKPKIKKQLEILSTQLSGEHVRFNIIDMQDEPDGYGFDCLTFQIADRMTGNMR QEKTTESIKFNHHWQKGAALSITYSATGAVHIILFPSTSDDSLATHDSLIVHHSYNVKHITPKKIEKAVKNLLHYHRVTG VLHKAALKDLILIRLLKIKMFFIQYNDKENKFRRVTALYIPTLSLIVSLAAAVASILALVSVKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25781; Mature: 25781
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEWKKELRAKFERDELRRLISNVNWIIFKPKIKKQLEILSTQLSGEHVRFNIIDMQDEPD CCHHHHHHHHCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEEEEECCCCC GYGFDCLTFQIADRMTGNMRQEKTTESIKFNHHWQKGAALSITYSATGAVHIILFPSTSD CCCCEEEHEEEHHHHCCCCHHHHHHHHEEECCCCCCCCEEEEEEECCCEEEEEEEECCCC DSLATHDSLIVHHSYNVKHITPKKIEKAVKNLLHYHRVTGVLHKAALKDLILIRLLKIKM CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE FFIQYNDKENKFRRVTALYIPTLSLIVSLAAAVASILALVSVKS EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEWKKELRAKFERDELRRLISNVNWIIFKPKIKKQLEILSTQLSGEHVRFNIIDMQDEPD CCHHHHHHHHCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEEEEECCCCC GYGFDCLTFQIADRMTGNMRQEKTTESIKFNHHWQKGAALSITYSATGAVHIILFPSTSD CCCCEEEHEEEHHHHCCCCHHHHHHHHEEECCCCCCCCEEEEEEECCCEEEEEEEECCCC DSLATHDSLIVHHSYNVKHITPKKIEKAVKNLLHYHRVTGVLHKAALKDLILIRLLKIKM CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE FFIQYNDKENKFRRVTALYIPTLSLIVSLAAAVASILALVSVKS EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA