Definition | Escherichia coli 55989, complete genome. |
---|---|
Accession | NC_011748 |
Length | 5,154,862 |
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The map label for this gene is insE
Identifier: 218698054
GI number: 218698054
Start: 4980643
End: 4980951
Strand: Direct
Name: insE
Synonym: EC55989_4864
Alternate gene names: 218698054
Gene position: 4980643-4980951 (Clockwise)
Preceding gene: 218698050
Following gene: 218698055
Centisome position: 96.62
GC content: 50.49
Gene sequence:
>309_bases GTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCT GAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAGCTCTACAACTGGCGCA GTAAACAGCAAAATCAGCAGACGTCTTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTG GCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGA
Upstream 100 bases:
>100_bases TCATCGATACTCATCGTGATTAGTATAATCGGGGCAGAATTATATGATCTTACCCAGCAATAGTGGACACGCGGCTAAGT GAGTAAACTCTCAGTCAGAG
Downstream 100 bases:
>100_bases AGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGC TGGTATACGTGGTGTCAGCG
Product: IS3 element protein InsE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MTHMTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLYNWRSKQQNQQTSSERELEMSTEIARLKRQL AERDEELAILQKAATYFAKRLK
Sequences:
>Translated_102_residues MTHMTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLYNWRSKQQNQQTSSERELEMSTEIARLKRQL AERDEELAILQKAATYFAKRLK >Mature_101_residues THMTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLYNWRSKQQNQQTSSERELEMSTEIARLKRQLA ERDEELAILQKAATYFAKRLK
Specific function: Involved in the transposition of the insertion sequence IS3 [H]
COG id: COG2963
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
Organism=Escherichia coli, GI226510958, Length=99, Percent_Identity=100, Blast_Score=196, Evalue=2e-52, Organism=Escherichia coli, GI226510933, Length=99, Percent_Identity=100, Blast_Score=196, Evalue=2e-52, Organism=Escherichia coli, GI226510930, Length=99, Percent_Identity=100, Blast_Score=196, Evalue=2e-52, Organism=Escherichia coli, GI226510928, Length=99, Percent_Identity=100, Blast_Score=196, Evalue=2e-52, Organism=Escherichia coli, GI226510927, Length=99, Percent_Identity=100, Blast_Score=196, Evalue=2e-52,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 11913; Mature: 11782
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHMTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLYNWRSKQQNQQ CCCCHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSSERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure THMTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLYNWRSKQQNQQ CCCHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSSERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2987844; 9278503 [H]