Definition | Escherichia coli 55989, complete genome. |
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Accession | NC_011748 |
Length | 5,154,862 |
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The map label for this gene is 218698025
Identifier: 218698025
GI number: 218698025
Start: 4957121
End: 4957639
Strand: Direct
Name: 218698025
Synonym: EC55989_4835
Alternate gene names: NA
Gene position: 4957121-4957639 (Clockwise)
Preceding gene: 218698024
Following gene: 218698026
Centisome position: 96.16
GC content: 31.02
Gene sequence:
>519_bases ATGTCGAGAAATGATATGATACATTGGGTGAACTTGTGGAAAGATATCTTAGGATTATATCCAAGAATCATTCAGCCAAA ATTTATTTTTATATCTTTGGTGACATTATTTGTATCAACCTGCGGAATATGGATTGGCCCATTATTTTTAAAAGATAATA CGCAGTTGGGTTTTTCTATTTTTTCATTTATTATTACCACATTGGGCGTATTAGCCGCGGAGTGTTTATCCAGAGATGAC GAGAACGAAAATCCTATTTCTTTATCTGAAAGGCACCGTAAACAAGTTAGAATATCTTGTTCAATATTTTTATGGTTCAT ATCATTTGTTTTTTTATTTTTTGGATTAAAAAATGACGTTAATTTCATGTTAATTTCATCACTTATTATAACTATAATAT TATGGTTTTCCATTACCGTTGTTAAGCCTGATTTTAAAATCCCTGTAACTCCAGATTCATTAGTGTCTGATGAATTAAGG AATATGAGTTCTAATGATGAGCCAGGTGAGGGGCTATAA
Upstream 100 bases:
>100_bases GTTGATGGGGATAAGCGGGTTAGCAAGATGCGAGATAGAGCGTTTTGGGAGCTTGTTTTTTGATTATTTTTGTAGATAGT ACAAGGTTAGGGTAAAAAGC
Downstream 100 bases:
>100_bases ATGTCTAATTCTATTGAGATCCATGCAATTAAGGTCACCCAACCATACGGCGAATTCTTTCAGACGGTTATGTCTGCCGA AGATTTATTGAAATGTATTT
Product: hypothetical protein; putative membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MSRNDMIHWVNLWKDILGLYPRIIQPKFIFISLVTLFVSTCGIWIGPLFLKDNTQLGFSIFSFIITTLGVLAAECLSRDD ENENPISLSERHRKQVRISCSIFLWFISFVFLFFGLKNDVNFMLISSLIITIILWFSITVVKPDFKIPVTPDSLVSDELR NMSSNDEPGEGL
Sequences:
>Translated_172_residues MSRNDMIHWVNLWKDILGLYPRIIQPKFIFISLVTLFVSTCGIWIGPLFLKDNTQLGFSIFSFIITTLGVLAAECLSRDD ENENPISLSERHRKQVRISCSIFLWFISFVFLFFGLKNDVNFMLISSLIITIILWFSITVVKPDFKIPVTPDSLVSDELR NMSSNDEPGEGL >Mature_171_residues SRNDMIHWVNLWKDILGLYPRIIQPKFIFISLVTLFVSTCGIWIGPLFLKDNTQLGFSIFSFIITTLGVLAAECLSRDDE NENPISLSERHRKQVRISCSIFLWFISFVFLFFGLKNDVNFMLISSLIITIILWFSITVVKPDFKIPVTPDSLVSDELRN MSSNDEPGEGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19740; Mature: 19609
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRNDMIHWVNLWKDILGLYPRIIQPKFIFISLVTLFVSTCGIWIGPLFLKDNTQLGFSI CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHH FSFIITTLGVLAAECLSRDDENENPISLSERHRKQVRISCSIFLWFISFVFLFFGLKNDV HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NFMLISSLIITIILWFSITVVKPDFKIPVTPDSLVSDELRNMSSNDEPGEGL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SRNDMIHWVNLWKDILGLYPRIIQPKFIFISLVTLFVSTCGIWIGPLFLKDNTQLGFSI CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHH FSFIITTLGVLAAECLSRDDENENPISLSERHRKQVRISCSIFLWFISFVFLFFGLKNDV HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NFMLISSLIITIILWFSITVVKPDFKIPVTPDSLVSDELRNMSSNDEPGEGL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA