Definition | Escherichia coli 55989, complete genome. |
---|---|
Accession | NC_011748 |
Length | 5,154,862 |
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The map label for this gene is idnK
Identifier: 218698016
GI number: 218698016
Start: 4942401
End: 4942964
Strand: Direct
Name: idnK
Synonym: EC55989_4826
Alternate gene names: 218698016
Gene position: 4942401-4942964 (Clockwise)
Preceding gene: 218698010
Following gene: 218698019
Centisome position: 95.88
GC content: 42.91
Gene sequence:
>564_bases ATGGCGGGTGAAAGCTTTATTTTGATGGGCGTTTCAGGGAGTGGTAAAACATTAATTGGTAGCAAGGTTGCCGCGTTATT ATCTGCTAAATTTATTGATGGTGACGATCTTCATCCAGCCAAAAATATAGATAAAATGTCGCAGGGTATTCCATTATCTG ATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATT GTCTGTTCATCATTAAAAAAACATTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGG CGACTATGAAACTATTCTCGCGCGAATGCAGCGTCGGGCTGGGCATTTTATGCCGGTAGCGTTACTAAAAAGTCAGTTTG AGGCACTGGAGCGTCCACAAGAAGATGAACAGGATATTGTGCGCATTGATATCAACCATGATATTGCCAATGTCACTGAA CAATGTCGGCAGGCTGTGCTGGCGATACGACAAAACAGAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGA ATGA
Upstream 100 bases:
>100_bases ATGTGCCTTGTAATTCTTATCAGCAGAAATAAAAAAACGTGAAATTATTATGCCACCAGGCGTAGTATCGCAGCAGGTAA GATGATTCAGGAGATTTTAA
Downstream 100 bases:
>100_bases TTTTCAAAAATCGGCTTTCAACACCACGCGGTAACGCGCCTTACCGTCGCGCACATGCTGGATGGCGTCGTTAATTTTCG ACATCGGGAACAATTCGGTA
Product: D-gluconate kinase
Products: NA
Alternate protein names: Gluconate kinase 1 [H]
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MAGESFILMGVSGSGKTLIGSKVAALLSAKFIDGDDLHPAKNIDKMSQGIPLSDEDRLPWLERLNDASYSLYKKNETGFI VCSSLKKHYRDILRKGSPHVHFLWLDGDYETILARMQRRAGHFMPVALLKSQFEALERPQEDEQDIVRIDINHDIANVTE QCRQAVLAIRQNRICAKEGSASDQRCE
Sequences:
>Translated_187_residues MAGESFILMGVSGSGKTLIGSKVAALLSAKFIDGDDLHPAKNIDKMSQGIPLSDEDRLPWLERLNDASYSLYKKNETGFI VCSSLKKHYRDILRKGSPHVHFLWLDGDYETILARMQRRAGHFMPVALLKSQFEALERPQEDEQDIVRIDINHDIANVTE QCRQAVLAIRQNRICAKEGSASDQRCE >Mature_186_residues AGESFILMGVSGSGKTLIGSKVAALLSAKFIDGDDLHPAKNIDKMSQGIPLSDEDRLPWLERLNDASYSLYKKNETGFIV CSSLKKHYRDILRKGSPHVHFLWLDGDYETILARMQRRAGHFMPVALLKSQFEALERPQEDEQDIVRIDINHDIANVTEQ CRQAVLAIRQNRICAKEGSASDQRCE
Specific function: Gluconate utilization system GNT-II. [C]
COG id: COG3265
COG function: function code G; Gluconate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gluconokinase gntK/gntV family [H]
Homologues:
Organism=Homo sapiens, GI299758445, Length=172, Percent_Identity=38.953488372093, Blast_Score=128, Evalue=3e-30, Organism=Escherichia coli, GI1790719, Length=187, Percent_Identity=98.9304812834225, Blast_Score=384, Evalue=1e-108, Organism=Escherichia coli, GI87082265, Length=161, Percent_Identity=47.2049689440994, Blast_Score=178, Evalue=2e-46, Organism=Caenorhabditis elegans, GI25146487, Length=156, Percent_Identity=39.7435897435897, Blast_Score=122, Evalue=9e-29, Organism=Saccharomyces cerevisiae, GI6320454, Length=158, Percent_Identity=37.9746835443038, Blast_Score=112, Evalue=4e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR006001 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.12 [H]
Molecular weight: Translated: 21071; Mature: 20940
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGESFILMGVSGSGKTLIGSKVAALLSAKFIDGDDLHPAKNIDKMSQGIPLSDEDRLPW CCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCH LERLNDASYSLYKKNETGFIVCSSLKKHYRDILRKGSPHVHFLWLDGDYETILARMQRRA HHHHCCCCCEEEECCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHC GHFMPVALLKSQFEALERPQEDEQDIVRIDINHDIANVTEQCRQAVLAIRQNRICAKEGS CCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCC ASDQRCE CCCCCCC >Mature Secondary Structure AGESFILMGVSGSGKTLIGSKVAALLSAKFIDGDDLHPAKNIDKMSQGIPLSDEDRLPW CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCH LERLNDASYSLYKKNETGFIVCSSLKKHYRDILRKGSPHVHFLWLDGDYETILARMQRRA HHHHCCCCCEEEECCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHC GHFMPVALLKSQFEALERPQEDEQDIVRIDINHDIANVTEQCRQAVLAIRQNRICAKEGS CCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCC ASDQRCE CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 9658018 [H]