| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is 218697522
Identifier: 218697522
GI number: 218697522
Start: 4372856
End: 4374181
Strand: Reverse
Name: 218697522
Synonym: EC55989_4278
Alternate gene names: NA
Gene position: 4374181-4372856 (Counterclockwise)
Preceding gene: 218697523
Following gene: 218697521
Centisome position: 84.86
GC content: 45.78
Gene sequence:
>1326_bases ATGAATGGTCAAATAATCACTGTTGCACTCATCCTGTTGGGGCACATATTTCTGACGCCTGCTGTACAGGCCATAGGGTT CGACTATTACAATGATCACGGTGTTATGTCTTACGGTAAAGGTTATTGGGGGGATAAGAAAATCATTGCCCAATTTCCGA AGATGAACAGAGCCGATTTGCGCCTTGTGACAAATATATCCGGGGAGCGGGAGTTGGTGGAAGGCTATATACCCACCGAT GAAATAAGCATAAAAAATGAGGAATACCACTGGGTGACAGACGGCCGCGTTATTCTCTGGCGTGGCAAAATCGTTAGCAA TCCACCGGGAACACCCACTGTCGATATTGCCAGCTTTCAGGCTATGGGCCGCTTCGCGGTCGATAAATATAGCCTCTATT TTGACGGACAGCGCACCGAAAGTAATAGCGGCGCGTCACGTGTTGATCTGGCGACACTAAAAGCTATCGAAGGTAACTCT ACCACGCTGGTGGATAGTAAAAATCTCTATTTGTCCGGTCGACGTCAGGGGAGCAGCAGTAATGTTACTGTATTAGAAAA AAGATGGTGGGGTATTAATCCACGTCTTATGAGTGTAAACAGAAATTTGTATTCCAATGATCTGCTTATCCGCAGTGGGC AGAATATTTATTTAAATGGCGTTCACCTTACGGCGAATGCAGACTCATTTGAGATAATTCGCTGGATACCTCATTCACTG CTGGTTTTTCGCGACAATAAGGGTATGCATCGTTATCCCTTTGGTCAATTATCAGACAAAGCGATACCCGTAGATGATGA CGTCTCTTTTGAAGTAGGGGAAAGTCGCGTTCGCTGGCGTAAACAGCTCACGTCCGACCGTCAGTGGAGCAAGTGGATAG ACCTACCAGATATTGAACCTGAACAATTCCATCTGATTACTGGCAATATTGCGCAATATAAAGATCGGTTGTATGTAACA AAATTATCGACATTTGGTGAAGACCAGCTTGAGATAATCCCGCTGGATACGCCAGACCTGGTCATTGATCGCTCATTTAA TAGCGGCAAACAGCATGCTTATTTTATCCGCCAATTACGGTCAAAGAGCTTGCAAATTATTCCAGTTAACGGTCCGCTAA CTAAAAACGATCGCTTCGCTTATGACGATCGCAATGTTTATACATGGACCGATACAGAGGTAAGGATTACGCCCTCCCCC TGCCCGGCGAAAACTCGTGTCAGAGAGGAGAACGTACGTGAAGTTCAAAACAGAGACATCATTATTCCGGTGACGGATGA ATCATGCCGGAACGCAGCCGCAGAGGTGCAAACTTTGAAGCCCTGA
Upstream 100 bases:
>100_bases CGGGATATGGCTATGGCGTAAATTACAAAACGGGATATCTGGACGGAAAAATTACCGATGACGGCGAATTTATTCCTGCC CCGCGCAATGAGGCGACAAA
Downstream 100 bases:
>100_bases CCCCATGCCGCTATACTGCCGCCATCACTTAAAAACAGGATACAACAATGAACGACAGTGAATTTCATCGCCTGGCTGAT CAACTCTGGCTGACCATTGA
Product: conserved hypothetical protein; putative exported protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 441; Mature: 441
Protein sequence:
>441_residues MNGQIITVALILLGHIFLTPAVQAIGFDYYNDHGVMSYGKGYWGDKKIIAQFPKMNRADLRLVTNISGERELVEGYIPTD EISIKNEEYHWVTDGRVILWRGKIVSNPPGTPTVDIASFQAMGRFAVDKYSLYFDGQRTESNSGASRVDLATLKAIEGNS TTLVDSKNLYLSGRRQGSSSNVTVLEKRWWGINPRLMSVNRNLYSNDLLIRSGQNIYLNGVHLTANADSFEIIRWIPHSL LVFRDNKGMHRYPFGQLSDKAIPVDDDVSFEVGESRVRWRKQLTSDRQWSKWIDLPDIEPEQFHLITGNIAQYKDRLYVT KLSTFGEDQLEIIPLDTPDLVIDRSFNSGKQHAYFIRQLRSKSLQIIPVNGPLTKNDRFAYDDRNVYTWTDTEVRITPSP CPAKTRVREENVREVQNRDIIIPVTDESCRNAAAEVQTLKP
Sequences:
>Translated_441_residues MNGQIITVALILLGHIFLTPAVQAIGFDYYNDHGVMSYGKGYWGDKKIIAQFPKMNRADLRLVTNISGERELVEGYIPTD EISIKNEEYHWVTDGRVILWRGKIVSNPPGTPTVDIASFQAMGRFAVDKYSLYFDGQRTESNSGASRVDLATLKAIEGNS TTLVDSKNLYLSGRRQGSSSNVTVLEKRWWGINPRLMSVNRNLYSNDLLIRSGQNIYLNGVHLTANADSFEIIRWIPHSL LVFRDNKGMHRYPFGQLSDKAIPVDDDVSFEVGESRVRWRKQLTSDRQWSKWIDLPDIEPEQFHLITGNIAQYKDRLYVT KLSTFGEDQLEIIPLDTPDLVIDRSFNSGKQHAYFIRQLRSKSLQIIPVNGPLTKNDRFAYDDRNVYTWTDTEVRITPSP CPAKTRVREENVREVQNRDIIIPVTDESCRNAAAEVQTLKP >Mature_441_residues MNGQIITVALILLGHIFLTPAVQAIGFDYYNDHGVMSYGKGYWGDKKIIAQFPKMNRADLRLVTNISGERELVEGYIPTD EISIKNEEYHWVTDGRVILWRGKIVSNPPGTPTVDIASFQAMGRFAVDKYSLYFDGQRTESNSGASRVDLATLKAIEGNS TTLVDSKNLYLSGRRQGSSSNVTVLEKRWWGINPRLMSVNRNLYSNDLLIRSGQNIYLNGVHLTANADSFEIIRWIPHSL LVFRDNKGMHRYPFGQLSDKAIPVDDDVSFEVGESRVRWRKQLTSDRQWSKWIDLPDIEPEQFHLITGNIAQYKDRLYVT KLSTFGEDQLEIIPLDTPDLVIDRSFNSGKQHAYFIRQLRSKSLQIIPVNGPLTKNDRFAYDDRNVYTWTDTEVRITPSP CPAKTRVREENVREVQNRDIIIPVTDESCRNAAAEVQTLKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50361; Mature: 50361
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGQIITVALILLGHIFLTPAVQAIGFDYYNDHGVMSYGKGYWGDKKIIAQFPKMNRADL CCCCEEHHHHHHHHHHHHHHHHHHHCCEEECCCCCEECCCCCCCCHHHHHHCCCCCCCCE RLVTNISGERELVEGYIPTDEISIKNEEYHWVTDGRVILWRGKIVSNPPGTPTVDIASFQ EEEECCCCCHHHHCCCCCCCCEEECCCCEEEEECCEEEEEECEEECCCCCCCEEEEHHHH AMGRFAVDKYSLYFDGQRTESNSGASRVDLATLKAIEGNSTTLVDSKNLYLSGRRQGSSS HHCCEEEEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCEEEEECCCCCCC NVTVLEKRWWGINPRLMSVNRNLYSNDLLIRSGQNIYLNGVHLTANADSFEIIRWIPHSL CEEEEEEECCCCCCEEEEECCCCCCCCEEEECCCEEEEEEEEEEECCCCEEHEEECCCEE LVFRDNKGMHRYPFGQLSDKAIPVDDDVSFEVGESRVRWRKQLTSDRQWSKWIDLPDIEP EEEECCCCCEECCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHCCCCCHHHCCCCCCCCC EQFHLITGNIAQYKDRLYVTKLSTFGEDQLEIIPLDTPDLVIDRSFNSGKQHAYFIRQLR CEEEEEECCHHHHCCEEEEEEECCCCCCCEEEEECCCCCEEEECCCCCCCHHHHHHHHHH SKSLQIIPVNGPLTKNDRFAYDDRNVYTWTDTEVRITPSPCPAKTRVREENVREVQNRDI HCCEEEEECCCCCCCCCCEEECCCEEEEEECCEEEECCCCCCCHHHHHHHHHHHHHCCCE IIPVTDESCRNAAAEVQTLKP EEEECCHHHHHHHHHHEECCC >Mature Secondary Structure MNGQIITVALILLGHIFLTPAVQAIGFDYYNDHGVMSYGKGYWGDKKIIAQFPKMNRADL CCCCEEHHHHHHHHHHHHHHHHHHHCCEEECCCCCEECCCCCCCCHHHHHHCCCCCCCCE RLVTNISGERELVEGYIPTDEISIKNEEYHWVTDGRVILWRGKIVSNPPGTPTVDIASFQ EEEECCCCCHHHHCCCCCCCCEEECCCCEEEEECCEEEEEECEEECCCCCCCEEEEHHHH AMGRFAVDKYSLYFDGQRTESNSGASRVDLATLKAIEGNSTTLVDSKNLYLSGRRQGSSS HHCCEEEEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCEEEEECCCCCCC NVTVLEKRWWGINPRLMSVNRNLYSNDLLIRSGQNIYLNGVHLTANADSFEIIRWIPHSL CEEEEEEECCCCCCEEEEECCCCCCCCEEEECCCEEEEEEEEEEECCCCEEHEEECCCEE LVFRDNKGMHRYPFGQLSDKAIPVDDDVSFEVGESRVRWRKQLTSDRQWSKWIDLPDIEP EEEECCCCCEECCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHCCCCCHHHCCCCCCCCC EQFHLITGNIAQYKDRLYVTKLSTFGEDQLEIIPLDTPDLVIDRSFNSGKQHAYFIRQLR CEEEEEECCHHHHCCEEEEEEECCCCCCCEEEEECCCCCEEEECCCCCCCHHHHHHHHHH SKSLQIIPVNGPLTKNDRFAYDDRNVYTWTDTEVRITPSPCPAKTRVREENVREVQNRDI HCCEEEEECCCCCCCCCCEEECCCEEEEEECCEEEECCCCCCCHHHHHHHHHHHHHCCCE IIPVTDESCRNAAAEVQTLKP EEEECCHHHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA