| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is yieK
Identifier: 218697441
GI number: 218697441
Start: 4273841
End: 4274563
Strand: Reverse
Name: yieK
Synonym: EC55989_4188
Alternate gene names: 218697441
Gene position: 4274563-4273841 (Counterclockwise)
Preceding gene: 218697442
Following gene: 218697437
Centisome position: 82.92
GC content: 49.52
Gene sequence:
>723_bases ATGAAATTAATCATTACCGAAGATTACCAGGAAATGAGCCGTGTCGCGGCACACCATCTGCTTGGTTATATGTCGAAGAC GCGTCGTGTTAACCTGGCAATTACCGCCGGTAGCACGCCCAAAGGCATGTATGAATACCTCACCACCCTGGTTAAAGGTA AGCCCTGGTATGATAACTGCTATTTCTATAATTCCGATGAAATTCCCTTTCGCGGCAAAGAGGGAGAAGGTGTAACGATT ACCAATCTGCGTAATCTGTTTTTCACCCCTGCGGGGATCAAAGAAGAGAATATCCAGAAGCTCACTATTGATAACTACCG CGAGCATGATCAGAAACTGGCGCGTGAAGGCGGCCTGGATTTGGTGGTGCTGGGATTAGGTGCAGATGGTCATTTTTGTG GCAATTTGCCGAATACGACCCATTTCCATGAGCAAACCGTGGAGTTCCCGATCCAGGGAGAGATGGTTGATATTGTGGCG CATGGTGAGTTGGGCGGCGACTTTTCGTTAGTGCCTGACAGCTACGTGACGATGGGGCCGAAAAGCATCATGGCGGCGAA AAACTTGCTGATAATTGTCAGTGGCGCAGGTAAAGCGCAGGCACTGAAAAATGTGCTGCAAGGTCCGGTTACCGAAGATG TTCCAGCTTCCGTGTTGCAGCTGCATCCTTCGCTGATGGTAATCGCTGATAAAGCCGCTGCCGCAGAATTAGCGCTCGAT TAA
Upstream 100 bases:
>100_bases ATTACCAGGAATATCCCGGCCTGAACCATGAAATGGATGTCTGGCGGCCTGCCTATGCAGCCTTCGTACAGAAATTATTT AAATAAAATAAGGCACTAAG
Downstream 100 bases:
>100_bases GCTGAAGAAATAAGGCCGGATGTATGAATTACGCTCCGGCCTGTTCTCATTATTTAAATAACTACGAAAAATCACCCCAC AGTCTCAGCTTGCCGCAGTG
Product: putative 6-phosphogluconolactonase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MKLIITEDYQEMSRVAAHHLLGYMSKTRRVNLAITAGSTPKGMYEYLTTLVKGKPWYDNCYFYNSDEIPFRGKEGEGVTI TNLRNLFFTPAGIKEENIQKLTIDNYREHDQKLAREGGLDLVVLGLGADGHFCGNLPNTTHFHEQTVEFPIQGEMVDIVA HGELGGDFSLVPDSYVTMGPKSIMAAKNLLIIVSGAGKAQALKNVLQGPVTEDVPASVLQLHPSLMVIADKAAAAELALD
Sequences:
>Translated_240_residues MKLIITEDYQEMSRVAAHHLLGYMSKTRRVNLAITAGSTPKGMYEYLTTLVKGKPWYDNCYFYNSDEIPFRGKEGEGVTI TNLRNLFFTPAGIKEENIQKLTIDNYREHDQKLAREGGLDLVVLGLGADGHFCGNLPNTTHFHEQTVEFPIQGEMVDIVA HGELGGDFSLVPDSYVTMGPKSIMAAKNLLIIVSGAGKAQALKNVLQGPVTEDVPASVLQLHPSLMVIADKAAAAELALD >Mature_240_residues MKLIITEDYQEMSRVAAHHLLGYMSKTRRVNLAITAGSTPKGMYEYLTTLVKGKPWYDNCYFYNSDEIPFRGKEGEGVTI TNLRNLFFTPAGIKEENIQKLTIDNYREHDQKLAREGGLDLVVLGLGADGHFCGNLPNTTHFHEQTVEFPIQGEMVDIVA HGELGGDFSLVPDSYVTMGPKSIMAAKNLLIIVSGAGKAQALKNVLQGPVTEDVPASVLQLHPSLMVIADKAAAAELALD
Specific function: Unknown
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family [H]
Homologues:
Organism=Homo sapiens, GI13027378, Length=252, Percent_Identity=28.5714285714286, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI19923881, Length=250, Percent_Identity=28.4, Blast_Score=80, Evalue=2e-15, Organism=Escherichia coli, GI48994958, Length=239, Percent_Identity=99.581589958159, Blast_Score=493, Evalue=1e-141, Organism=Escherichia coli, GI1789530, Length=247, Percent_Identity=26.3157894736842, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1786893, Length=251, Percent_Identity=25.8964143426295, Blast_Score=75, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17554876, Length=250, Percent_Identity=27.6, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI24581960, Length=249, Percent_Identity=26.1044176706827, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI19920764, Length=249, Percent_Identity=26.1044176706827, Blast_Score=79, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006148 - InterPro: IPR004547 - InterPro: IPR018321 [H]
Pfam domain/function: PF01182 Glucosamine_iso [H]
EC number: NA
Molecular weight: Translated: 26277; Mature: 26277
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: PS01161 GLC_GALNAC_ISOMERASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIITEDYQEMSRVAAHHLLGYMSKTRRVNLAITAGSTPKGMYEYLTTLVKGKPWYDNC CEEEEECCHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCE YFYNSDEIPFRGKEGEGVTITNLRNLFFTPAGIKEENIQKLTIDNYREHDQKLAREGGLD EEECCCCCCCCCCCCCCEEEEEEHHHEECCCCCCCCCCEEEECCCHHHHHHHHHHHCCCE LVVLGLGADGHFCGNLPNTTHFHEQTVEFPIQGEMVDIVAHGELGGDFSLVPDSYVTMGP EEEEEECCCCCEECCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCEEECCCCCEECCC KSIMAAKNLLIIVSGAGKAQALKNVLQGPVTEDVPASVLQLHPSLMVIADKAAAAELALD HHHHCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEECCCCCHHCCCC >Mature Secondary Structure MKLIITEDYQEMSRVAAHHLLGYMSKTRRVNLAITAGSTPKGMYEYLTTLVKGKPWYDNC CEEEEECCHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCE YFYNSDEIPFRGKEGEGVTITNLRNLFFTPAGIKEENIQKLTIDNYREHDQKLAREGGLD EEECCCCCCCCCCCCCCEEEEEEHHHEECCCCCCCCCCEEEECCCHHHHHHHHHHHCCCE LVVLGLGADGHFCGNLPNTTHFHEQTVEFPIQGEMVDIVAHGELGGDFSLVPDSYVTMGP EEEEEECCCCCEECCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCEEECCCCCEECCC KSIMAAKNLLIIVSGAGKAQALKNVLQGPVTEDVPASVLQLHPSLMVIADKAAAAELALD HHHHCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEECCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]