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The map label for this gene is yidJ

Identifier: 218697402

GI number: 218697402

Start: 4232071

End: 4233564

Strand: Reverse

Name: yidJ

Synonym: EC55989_4147

Alternate gene names: 218697402

Gene position: 4233564-4232071 (Counterclockwise)

Preceding gene: 218697403

Following gene: 218697400

Centisome position: 82.13

GC content: 51.94

Gene sequence:

>1494_bases
ATGAAACGCCCCAATTTTCTGTTCATCATGACCGATACCCAGGCCACCAATATGGTCGGTTGCTATAGCGGTAAACCGCT
GAATACGCAAAATATTGATAGTCTGGCGGCGGAAGGTATTCGCTTTAATTCCGCCTACACCTGTTCACCGGTTTGTACGC
CTGCACGCGCCGGACTATTTACCGGTATCTACGCTAACCAGTCCGGCCCGTGGACCAACAACGTCGCGCCAGGCAAAAAC
ATCTCCACTATGGGGCGCTACTTTAAGGATGCCGGCTATCACACCTGTTACATCGGCAAATGGCATCTCGACGGTCATGA
CTATTTCGGCACTGGCGAGTGTCCGCCGGAGTGGGACGCTGATTACTGGTTCGATGGGGCGAACTACCTTAGCGAACTGA
CGGAAAAAGAGATCAGCCTGTGGCGCAATGGCCTAAACAGCGTTGAGGATTTACAGGCGAACCATATCGACGAAACCTTC
ACCTGGGCGCACCGCATCAGCAATCGGGCGGTAGATTTTCTGCAACAGCCCGCGCGCGCCGAGGAACCCTTCCTGATGGT
GGTTTCGTATGATGAGCCGCATCACCCGTTCACCTGTCCGGTGGAGTATTTAGAGAAATACGCTGATTTTTACTACGATC
TGGGCGAGAAAGCTCAGGATGACCTGGCGAACAAACCGGAACATCACCGCTTATGGGCGCAGGCGATGCCATCGCCAGTC
GGTGATGACGGGCTTTATCACCATCCGCTCTATTTTGCCTGTAATGACTTTGTTGATGACCAAATCGGACGGGTCATCAA
TGCCTTAACGCCAGAGCAACGTGAAAATACGTGGGTCATTTATACTTCCGATCACGGCGAAATGATGGGCGCACATAAGC
TGATCAGTAAAGGAGCGGCGATGTATGACGACATCACCCGTATTCCGCTGATCATCCGTTCGCCGCAAGGGGAGCGGCGA
CAGGTCGATACGCCAGTCAGTCATATCGATTTACTGCCGACAATGATGGCGCTGGCAGATATTGAAAAACCAGAGATTCT
GCCGGGGGAAAATATCCTTGCCGTGAAAGAGCCACGCGGTGTAATGGTGGAATTTAACCGCTACGAGATTGAGCATGACA
GCTTTGGCGGTTTTATTCCGGTGCGTTGCTGGGTGACGGATGACTTTAAACTGGTACTCAACCTCTTCACCAGTGATGAA
CTTTACGATCGCCGTAATGACCCAAATGAAATGCATAACCTGATCGATGATATCCGTTTTGCAGACGTTCGCAGCAAAAT
GCATGACGCCTTATTGGATTACATGGACAAAATTCGCGATCCGTTCCGCAGTTACCAATGGAGCCTGCGTCCGTGGCGTA
AAGATGCACTGCCGCGCTGGATGGGGGCATTTCGTCCACGCCCACAAGATGGCTATTCGCCGGTGGTACGTGACTATGAC
ACCGGCCTACCGACGCAAGGAGTGAAAGTGGAAGAGAAAAAACAGAAGTTCTGA

Upstream 100 bases:

>100_bases
ATTTCATTGCCGCCGTAGTGATTGTCTACCTGATTTTTGACAGCTGGCGGCATCGTCACGACCCAGCCGTAACCTTTACT
CCCGACGCGAAGGATAGCCT

Downstream 100 bases:

>100_bases
CGATAATGCCCGCTGATGAACACCCGGCGGGCATTATTCAGGCTGCTTAAACCAGTGAACCGCCGGTCAGGAAGGAAAAA
ATCAGGAATATCAGCAAAAT

Product: putative sulfatase/phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MKRPNFLFIMTDTQATNMVGCYSGKPLNTQNIDSLAAEGIRFNSAYTCSPVCTPARAGLFTGIYANQSGPWTNNVAPGKN
ISTMGRYFKDAGYHTCYIGKWHLDGHDYFGTGECPPEWDADYWFDGANYLSELTEKEISLWRNGLNSVEDLQANHIDETF
TWAHRISNRAVDFLQQPARAEEPFLMVVSYDEPHHPFTCPVEYLEKYADFYYDLGEKAQDDLANKPEHHRLWAQAMPSPV
GDDGLYHHPLYFACNDFVDDQIGRVINALTPEQRENTWVIYTSDHGEMMGAHKLISKGAAMYDDITRIPLIIRSPQGERR
QVDTPVSHIDLLPTMMALADIEKPEILPGENILAVKEPRGVMVEFNRYEIEHDSFGGFIPVRCWVTDDFKLVLNLFTSDE
LYDRRNDPNEMHNLIDDIRFADVRSKMHDALLDYMDKIRDPFRSYQWSLRPWRKDALPRWMGAFRPRPQDGYSPVVRDYD
TGLPTQGVKVEEKKQKF

Sequences:

>Translated_497_residues
MKRPNFLFIMTDTQATNMVGCYSGKPLNTQNIDSLAAEGIRFNSAYTCSPVCTPARAGLFTGIYANQSGPWTNNVAPGKN
ISTMGRYFKDAGYHTCYIGKWHLDGHDYFGTGECPPEWDADYWFDGANYLSELTEKEISLWRNGLNSVEDLQANHIDETF
TWAHRISNRAVDFLQQPARAEEPFLMVVSYDEPHHPFTCPVEYLEKYADFYYDLGEKAQDDLANKPEHHRLWAQAMPSPV
GDDGLYHHPLYFACNDFVDDQIGRVINALTPEQRENTWVIYTSDHGEMMGAHKLISKGAAMYDDITRIPLIIRSPQGERR
QVDTPVSHIDLLPTMMALADIEKPEILPGENILAVKEPRGVMVEFNRYEIEHDSFGGFIPVRCWVTDDFKLVLNLFTSDE
LYDRRNDPNEMHNLIDDIRFADVRSKMHDALLDYMDKIRDPFRSYQWSLRPWRKDALPRWMGAFRPRPQDGYSPVVRDYD
TGLPTQGVKVEEKKQKF
>Mature_497_residues
MKRPNFLFIMTDTQATNMVGCYSGKPLNTQNIDSLAAEGIRFNSAYTCSPVCTPARAGLFTGIYANQSGPWTNNVAPGKN
ISTMGRYFKDAGYHTCYIGKWHLDGHDYFGTGECPPEWDADYWFDGANYLSELTEKEISLWRNGLNSVEDLQANHIDETF
TWAHRISNRAVDFLQQPARAEEPFLMVVSYDEPHHPFTCPVEYLEKYADFYYDLGEKAQDDLANKPEHHRLWAQAMPSPV
GDDGLYHHPLYFACNDFVDDQIGRVINALTPEQRENTWVIYTSDHGEMMGAHKLISKGAAMYDDITRIPLIIRSPQGERR
QVDTPVSHIDLLPTMMALADIEKPEILPGENILAVKEPRGVMVEFNRYEIEHDSFGGFIPVRCWVTDDFKLVLNLFTSDE
LYDRRNDPNEMHNLIDDIRFADVRSKMHDALLDYMDKIRDPFRSYQWSLRPWRKDALPRWMGAFRPRPQDGYSPVVRDYD
TGLPTQGVKVEEKKQKF

Specific function: Unknown

COG id: COG3119

COG function: function code P; Arylsulfatase A and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sulfatase family [H]

Homologues:

Organism=Homo sapiens, GI4557659, Length=421, Percent_Identity=26.1282660332542, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI189571643, Length=384, Percent_Identity=24.7395833333333, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI189571641, Length=384, Percent_Identity=24.7395833333333, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI189571638, Length=384, Percent_Identity=24.7395833333333, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI189571636, Length=384, Percent_Identity=24.7395833333333, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI53831991, Length=410, Percent_Identity=25.1219512195122, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI240255483, Length=376, Percent_Identity=24.468085106383, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI29789100, Length=376, Percent_Identity=24.468085106383, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI240255478, Length=376, Percent_Identity=24.468085106383, Blast_Score=97, Evalue=5e-20,
Organism=Homo sapiens, GI5360208, Length=307, Percent_Identity=28.0130293159609, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI71852584, Length=437, Percent_Identity=25.1716247139588, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI71852586, Length=113, Percent_Identity=38.9380530973451, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI157266309, Length=162, Percent_Identity=32.0987654320988, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI45430057, Length=395, Percent_Identity=24.0506329113924, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI109389362, Length=217, Percent_Identity=28.110599078341, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI59797060, Length=217, Percent_Identity=28.110599078341, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI58743319, Length=113, Percent_Identity=33.6283185840708, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI4503899, Length=384, Percent_Identity=23.6979166666667, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI31742482, Length=111, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=8e-12,
Organism=Escherichia coli, GI1790112, Length=497, Percent_Identity=99.1951710261569, Blast_Score=1040, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17568795, Length=370, Percent_Identity=26.4864864864865, Blast_Score=106, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17559078, Length=111, Percent_Identity=32.4324324324324, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI19922168, Length=366, Percent_Identity=26.775956284153, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24653364, Length=366, Percent_Identity=27.0491803278689, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24647401, Length=395, Percent_Identity=24.3037974683544, Blast_Score=105, Evalue=9e-23,
Organism=Drosophila melanogaster, GI24666109, Length=306, Percent_Identity=24.1830065359477, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI281366397, Length=368, Percent_Identity=23.9130434782609, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI281366395, Length=368, Percent_Identity=23.9130434782609, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24666163, Length=368, Percent_Identity=23.9130434782609, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI281363223, Length=376, Percent_Identity=22.3404255319149, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24666175, Length=380, Percent_Identity=25, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR000917 [H]

Pfam domain/function: PF00884 Sulfatase [H]

EC number: 3.1.6.- [C]

Molecular weight: Translated: 57267; Mature: 57267

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS00523 SULFATASE_1 ; PS00149 SULFATASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRPNFLFIMTDTQATNMVGCYSGKPLNTQNIDSLAAEGIRFNSAYTCSPVCTPARAGLF
CCCCCEEEEEECCCCCCEEEECCCCCCCCCCHHHHHHCCEECCCCEECCCCCCCHHHHHE
TGIYANQSGPWTNNVAPGKNISTMGRYFKDAGYHTCYIGKWHLDGHDYFGTGECPPEWDA
EEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCC
DYWFDGANYLSELTEKEISLWRNGLNSVEDLQANHIDETFTWAHRISNRAVDFLQQPARA
CCEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC
EEPFLMVVSYDEPHHPFTCPVEYLEKYADFYYDLGEKAQDDLANKPEHHRLWAQAMPSPV
CCCEEEEEECCCCCCCEECCHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHCCCCC
GDDGLYHHPLYFACNDFVDDQIGRVINALTPEQRENTWVIYTSDHGEMMGAHKLISKGAA
CCCCCEECCHHEEHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCH
MYDDITRIPLIIRSPQGERRQVDTPVSHIDLLPTMMALADIEKPEILPGENILAVKEPRG
HHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCC
VMVEFNRYEIEHDSFGGFIPVRCWVTDDFKLVLNLFTSDELYDRRNDPNEMHNLIDDIRF
EEEEEEEEEECCCCCCCEEEEEEEECCCHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHH
ADVRSKMHDALLDYMDKIRDPFRSYQWSLRPWRKDALPRWMGAFRPRPQDGYSPVVRDYD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCC
TGLPTQGVKVEEKKQKF
CCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MKRPNFLFIMTDTQATNMVGCYSGKPLNTQNIDSLAAEGIRFNSAYTCSPVCTPARAGLF
CCCCCEEEEEECCCCCCEEEECCCCCCCCCCHHHHHHCCEECCCCEECCCCCCCHHHHHE
TGIYANQSGPWTNNVAPGKNISTMGRYFKDAGYHTCYIGKWHLDGHDYFGTGECPPEWDA
EEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCC
DYWFDGANYLSELTEKEISLWRNGLNSVEDLQANHIDETFTWAHRISNRAVDFLQQPARA
CCEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC
EEPFLMVVSYDEPHHPFTCPVEYLEKYADFYYDLGEKAQDDLANKPEHHRLWAQAMPSPV
CCCEEEEEECCCCCCCEECCHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHCCCCC
GDDGLYHHPLYFACNDFVDDQIGRVINALTPEQRENTWVIYTSDHGEMMGAHKLISKGAA
CCCCCEECCHHEEHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCH
MYDDITRIPLIIRSPQGERRQVDTPVSHIDLLPTMMALADIEKPEILPGENILAVKEPRG
HHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCC
VMVEFNRYEIEHDSFGGFIPVRCWVTDDFKLVLNLFTSDELYDRRNDPNEMHNLIDDIRF
EEEEEEEEEECCCCCCCEEEEEEEECCCHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHH
ADVRSKMHDALLDYMDKIRDPFRSYQWSLRPWRKDALPRWMGAFRPRPQDGYSPVVRDYD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCC
TGLPTQGVKVEEKKQKF
CCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Sulfuric ester hydrolases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]