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The map label for this gene is rfaK

Identifier: 218697347

GI number: 218697347

Start: 4176208

End: 4177350

Strand: Reverse

Name: rfaK

Synonym: EC55989_4090

Alternate gene names: 218697347

Gene position: 4177350-4176208 (Counterclockwise)

Preceding gene: 218697348

Following gene: 218697342

Centisome position: 81.04

GC content: 37.01

Gene sequence:

>1143_bases
ATGGTTGATAAAATAATATTTACGGTTACTCCTATTTTTTCAATTCCTCCTCGCGGAGCGGCTGCTGTTGAAACGTGGAT
GTATCAGGTTGCTCAGCGTACCAATTTTCCAAATCGTATTGTTTGTATCAAAAATCCAGGATACTCAAATTACACCTTTG
TTAATGATAATTGTAGTATTCATAGGGTTGGATTCAGTCGCATATATAAGCGGTTATTTCAAAAATGGACAAGACTTGAT
CCTCTTCCATATTCACAGAGAATATTGAATATTGCACATGATTTTCCTATAACGAAAGAAAGTGTTATTGTAGTTCATAA
TAGCATGAAGCTATACACTCAAATTCGTAAGCGAGCTCCTCAGGCAAGAGTGGTTATACATATGCATAATGCATTTGAAC
CAAAATTGCTTGAGCAAAATGTTAAAATGATAGTGCCTAGTTTATACTTGAAAAAGTATTACCAATCTTATTTAGCAAAT
GCAGATATTGAGATTGTACCAAATGGAATTGATTTAGAAACCTATCAATCTAATTTTCAGCCGATCACTAGAAGCGAACT
TAATATCTCCCCTGAAGAGAAAATTATTTTTTATGCTGGGCGTATCGTCCCTGACAAAGGCATATTGCTGTTGATGCAAT
CATTCGAAAAATTGGCCGCTGCTCACAAAAATTTAAAATTAGTTGTGATTGGTGATTATACAGAAATGAGTAAAAGTGAC
AAAGGTGCATATCAACGCAATGTCAGGGAAATTGCAAAACGTTTGAAGGATCGTTGCATTATGTTAGGAAGCATACCGCC
TGAAAAGATGCATTGTTATTACCCACTGGCAGATTTAGTCGTCATTCCTTCCCAGTTCCAGGAACCATTTTGCATGGTGG
CAATTGAAGCTATGGGTGCTGGTAAGCCTGTTTTAGTGAGTACGCGTGGGGGGATGACGGAATTTGTCAAAGAAAATACT
ACGGGATTCCATTTAAAAGAACCTATGACTGCAGACTCCATAAGCAGCGATATTTTAAAAACGTTAGCGAATCCTGAATT
AACAGCAGTTGCAAAGCAAGGTCAGGACTTTGTGTTTGAACACTACAGTTGGGATGGCGTAACTCAAAGATTCGAAGAGG
TTATTCATAATTGGTTTGAATAA

Upstream 100 bases:

>100_bases
AGTACAAAGAAAAATATAAACACTTGCTTTACCAGAAAAAATTTCTCGATGGTGTTTTTACAGCAATTAAATATAATGTT
ATGAAAGGTTAATATACGAG

Downstream 100 bases:

>100_bases
ATAAAAAGGCCGCATTATGCAGCCTTTTTTATTTTTTACTTGTTTTTCATCGCTAATAATAAGCCGGCGTAAACGCCTAA
TAAATTTGGTTCAATTTGTT

Product: Lipopolysaccharide 1, 2-N-acetylglucosaminetransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MVDKIIFTVTPIFSIPPRGAAAVETWMYQVAQRTNFPNRIVCIKNPGYSNYTFVNDNCSIHRVGFSRIYKRLFQKWTRLD
PLPYSQRILNIAHDFPITKESVIVVHNSMKLYTQIRKRAPQARVVIHMHNAFEPKLLEQNVKMIVPSLYLKKYYQSYLAN
ADIEIVPNGIDLETYQSNFQPITRSELNISPEEKIIFYAGRIVPDKGILLLMQSFEKLAAAHKNLKLVVIGDYTEMSKSD
KGAYQRNVREIAKRLKDRCIMLGSIPPEKMHCYYPLADLVVIPSQFQEPFCMVAIEAMGAGKPVLVSTRGGMTEFVKENT
TGFHLKEPMTADSISSDILKTLANPELTAVAKQGQDFVFEHYSWDGVTQRFEEVIHNWFE

Sequences:

>Translated_380_residues
MVDKIIFTVTPIFSIPPRGAAAVETWMYQVAQRTNFPNRIVCIKNPGYSNYTFVNDNCSIHRVGFSRIYKRLFQKWTRLD
PLPYSQRILNIAHDFPITKESVIVVHNSMKLYTQIRKRAPQARVVIHMHNAFEPKLLEQNVKMIVPSLYLKKYYQSYLAN
ADIEIVPNGIDLETYQSNFQPITRSELNISPEEKIIFYAGRIVPDKGILLLMQSFEKLAAAHKNLKLVVIGDYTEMSKSD
KGAYQRNVREIAKRLKDRCIMLGSIPPEKMHCYYPLADLVVIPSQFQEPFCMVAIEAMGAGKPVLVSTRGGMTEFVKENT
TGFHLKEPMTADSISSDILKTLANPELTAVAKQGQDFVFEHYSWDGVTQRFEEVIHNWFE
>Mature_380_residues
MVDKIIFTVTPIFSIPPRGAAAVETWMYQVAQRTNFPNRIVCIKNPGYSNYTFVNDNCSIHRVGFSRIYKRLFQKWTRLD
PLPYSQRILNIAHDFPITKESVIVVHNSMKLYTQIRKRAPQARVVIHMHNAFEPKLLEQNVKMIVPSLYLKKYYQSYLAN
ADIEIVPNGIDLETYQSNFQPITRSELNISPEEKIIFYAGRIVPDKGILLLMQSFEKLAAAHKNLKLVVIGDYTEMSKSD
KGAYQRNVREIAKRLKDRCIMLGSIPPEKMHCYYPLADLVVIPSQFQEPFCMVAIEAMGAGKPVLVSTRGGMTEFVKENT
TGFHLKEPMTADSISSDILKTLANPELTAVAKQGQDFVFEHYSWDGVTQRFEEVIHNWFE

Specific function: Adds the terminal N-acetyl-D-glucosamine group on the glucose(II) group of LPS [H]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: =2.4.1.56 [H]

Molecular weight: Translated: 43622; Mature: 43622

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDKIIFTVTPIFSIPPRGAAAVETWMYQVAQRTNFPNRIVCIKNPGYSNYTFVNDNCSI
CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEECCCCCE
HRVGFSRIYKRLFQKWTRLDPLPYSQRILNIAHDFPITKESVIVVHNSMKLYTQIRKRAP
EECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHCC
QARVVIHMHNAFEPKLLEQNVKMIVPSLYLKKYYQSYLANADIEIVPNGIDLETYQSNFQ
CEEEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCC
PITRSELNISPEEKIIFYAGRIVPDKGILLLMQSFEKLAAAHKNLKLVVIGDYTEMSKSD
CCCCCCCCCCCCCEEEEEECEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHCCCC
KGAYQRNVREIAKRLKDRCIMLGSIPPEKMHCYYPLADLVVIPSQFQEPFCMVAIEAMGA
CCHHHHHHHHHHHHHHHHEEEECCCCHHHEEEEECHHHEEECCHHHCCCEEEEEEECCCC
GKPVLVSTRGGMTEFVKENTTGFHLKEPMTADSISSDILKTLANPELTAVAKQGQDFVFE
CCCEEEECCCCHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCCCCEEHHHHCCCCEEEE
HYSWDGVTQRFEEVIHNWFE
ECCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVDKIIFTVTPIFSIPPRGAAAVETWMYQVAQRTNFPNRIVCIKNPGYSNYTFVNDNCSI
CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEECCCCCE
HRVGFSRIYKRLFQKWTRLDPLPYSQRILNIAHDFPITKESVIVVHNSMKLYTQIRKRAP
EECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHCC
QARVVIHMHNAFEPKLLEQNVKMIVPSLYLKKYYQSYLANADIEIVPNGIDLETYQSNFQ
CEEEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCC
PITRSELNISPEEKIIFYAGRIVPDKGILLLMQSFEKLAAAHKNLKLVVIGDYTEMSKSD
CCCCCCCCCCCCCEEEEEECEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHCCCC
KGAYQRNVREIAKRLKDRCIMLGSIPPEKMHCYYPLADLVVIPSQFQEPFCMVAIEAMGA
CCHHHHHHHHHHHHHHHHEEEECCCCHHHEEEEECHHHEEECCHHHCCCEEEEEEECCCC
GKPVLVSTRGGMTEFVKENTTGFHLKEPMTADSISSDILKTLANPELTAVAKQGQDFVFE
CCCEEEECCCCHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCCCCEEHHHHCCCCEEEE
HYSWDGVTQRFEEVIHNWFE
ECCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1657881; 11677609 [H]