Definition | Escherichia coli 55989, complete genome. |
---|---|
Accession | NC_011748 |
Length | 5,154,862 |
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The map label for this gene is bcsZ
Identifier: 218697241
GI number: 218697241
Start: 4054316
End: 4055422
Strand: Reverse
Name: bcsZ
Synonym: EC55989_3978
Alternate gene names: 218697241
Gene position: 4055422-4054316 (Counterclockwise)
Preceding gene: 218697242
Following gene: 218697240
Centisome position: 78.67
GC content: 54.56
Gene sequence:
>1107_bases ATGAATGTGTTGCGTAGTGGAATCGTGACGATGCTGCTGTTGGCTGCCTTTAGTGTTCAGGCAGCCTGTACCTGGCCTGC CTGGGAGCAGTTTAAAAAGGATTACATCAGTCAGGAAGGGCGCGTCATCGACCCCAGCGACGCGCGCAAAATCACCACCT CCGAAGGGCAAAGTTACGGTATGTTCTTTGCCCTGGCGGCTAACGACCGTGTAGCTTTCGATAATATTCTCGACTGGACG CAGAACAATCTCGCTCAGGGCTCTTTAAAAGAACGTTTGCCCGCCTGGCTGTGGGGCAAGAAAGAGAACAGTAAGTGGGA AGTGCTGGACAGCAATTCGGCCTCCGATGGTGATGTCTGGATGGCCTGGTCGTTGCTGGAGGCGGGGCGTTTGTGGAAAG AGCAGCGTTATACCGACATCGGCAGCGCGTTGCTAAAACGTATCGCGCGGGAGGAAGTGGTGACGGTGCCTGGGCTGGGT TCCATGTTGTTACCGGGCAAAGTGGGTTTTGCTGAGGATAACAGCTGGCGTTTTAACCCCAGCTACCTGCCGCCGACGCT GGCGCAGTATTTCACCCGCTTTGGCGCGCCGTGGACCACGCTGCGCGAAACCAATCAACGTTTATTGCTGGAAACCGCCC CGAAAGGTTTTTCGCCAGACTGGGTGCGCTATGAGAAAGACAAAGGCTGGCAGCTAAAAGCCGAAAAAACATTGATCAGC AGCTACGACGCTATCCGCGTTTACATGTGGGTAGGCATGATGCCTGACAGCGATCCGCAAAAAGCGCGGATGCTCAACCG GTTTAAACCGATGGCGACATTCACTGAGAAAAACGGTTATCCGCCGGAAAAAGTGGATGTGGCTACGGGGAAAGCGCAGG GTAAAGGACCGGTCGGTTTTTCTGCCGCCATGCTGCCCTTTTTACAAAACCGCGATGCGCAGGCCGTTCAGCGCCAGCGC GTGGCCGATAACTTTCCCGGCAGCGATGCCTATTACAACTATGTGCTGACCCTGTTTGGACAAGGCTGGGATCAACACCG TTTCCGCTTCTCGACAAAAGGTGAGTTATTACCTGACTGGGGCCAGGAATGCGCAAATTCACACTAA
Upstream 100 bases:
>100_bases GCTGGCGGCTATCAGTGTGATATTGCTGGCATGGGTACTGTGGCGTCTGCTGCGAATTATTAGTCGTCGTCGTCTTAACC CGGATAACGAGTAATTGAAG
Downstream 100 bases:
>100_bases ACATATTCACGCTTTCCCTCGGTCTGGCCGTCATGCCGATGGTCGAGGCAGCACCAACCGCTCAGCAACAGTTGCTGGAG CAAGTTCGGTTAGGCGAAGC
Product: endo-1,4-D-glucanase
Products: NA
Alternate protein names: Carboxymethylcellulase; CMCase; Cellulase; Endo-1,4-beta-glucanase [H]
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MNVLRSGIVTMLLLAAFSVQAACTWPAWEQFKKDYISQEGRVIDPSDARKITTSEGQSYGMFFALAANDRVAFDNILDWT QNNLAQGSLKERLPAWLWGKKENSKWEVLDSNSASDGDVWMAWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLG SMLLPGKVGFAEDNSWRFNPSYLPPTLAQYFTRFGAPWTTLRETNQRLLLETAPKGFSPDWVRYEKDKGWQLKAEKTLIS SYDAIRVYMWVGMMPDSDPQKARMLNRFKPMATFTEKNGYPPEKVDVATGKAQGKGPVGFSAAMLPFLQNRDAQAVQRQR VADNFPGSDAYYNYVLTLFGQGWDQHRFRFSTKGELLPDWGQECANSH
Sequences:
>Translated_368_residues MNVLRSGIVTMLLLAAFSVQAACTWPAWEQFKKDYISQEGRVIDPSDARKITTSEGQSYGMFFALAANDRVAFDNILDWT QNNLAQGSLKERLPAWLWGKKENSKWEVLDSNSASDGDVWMAWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLG SMLLPGKVGFAEDNSWRFNPSYLPPTLAQYFTRFGAPWTTLRETNQRLLLETAPKGFSPDWVRYEKDKGWQLKAEKTLIS SYDAIRVYMWVGMMPDSDPQKARMLNRFKPMATFTEKNGYPPEKVDVATGKAQGKGPVGFSAAMLPFLQNRDAQAVQRQR VADNFPGSDAYYNYVLTLFGQGWDQHRFRFSTKGELLPDWGQECANSH >Mature_368_residues MNVLRSGIVTMLLLAAFSVQAACTWPAWEQFKKDYISQEGRVIDPSDARKITTSEGQSYGMFFALAANDRVAFDNILDWT QNNLAQGSLKERLPAWLWGKKENSKWEVLDSNSASDGDVWMAWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLG SMLLPGKVGFAEDNSWRFNPSYLPPTLAQYFTRFGAPWTTLRETNQRLLLETAPKGFSPDWVRYEKDKGWQLKAEKTLIS SYDAIRVYMWVGMMPDSDPQKARMLNRFKPMATFTEKNGYPPEKVDVATGKAQGKGPVGFSAAMLPFLQNRDAQAVQRQR VADNFPGSDAYYNYVLTLFGQGWDQHRFRFSTKGELLPDWGQECANSH
Specific function: Hydrolyzes carboxymethylcellulose [H]
COG id: COG3405
COG function: function code G; Endoglucanase Y
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 8 (cellulase D) family [H]
Homologues:
Organism=Escherichia coli, GI1789951, Length=368, Percent_Identity=99.4565217391304, Blast_Score=755, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR002037 - InterPro: IPR019834 [H]
Pfam domain/function: PF01270 Glyco_hydro_8 [H]
EC number: =3.2.1.4 [H]
Molecular weight: Translated: 41789; Mature: 41789
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: PS00812 GLYCOSYL_HYDROL_F8
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVLRSGIVTMLLLAAFSVQAACTWPAWEQFKKDYISQEGRVIDPSDARKITTSEGQSYG CCHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHCCCCCEECCCCCCEEECCCCCCCC MFFALAANDRVAFDNILDWTQNNLAQGSLKERLPAWLWGKKENSKWEVLDSNSASDGDVW EEEEEECCCCCHHHHHHHHHHCCHHCCCHHHHCCHHCCCCCCCCCEEEEECCCCCCCCEE MAWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLGSMLLPGKVGFAEDNSWRFNP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCEEECC SYLPPTLAQYFTRFGAPWTTLRETNQRLLLETAPKGFSPDWVRYEKDKGWQLKAEKTLIS CCCCHHHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCCCCCEEEECCCCCEEEHHHHHHH SYDAIRVYMWVGMMPDSDPQKARMLNRFKPMATFTEKNGYPPEKVDVATGKAQGKGPVGF HHHHEEEEEEEECCCCCCHHHHHHHHHHCCHHHHHCCCCCCCCCEEECCCCCCCCCCCCH SAAMLPFLQNRDAQAVQRQRVADNFPGSDAYYNYVLTLFGQGWDQHRFRFSTKGELLPDW HHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHH GQECANSH HHHHCCCC >Mature Secondary Structure MNVLRSGIVTMLLLAAFSVQAACTWPAWEQFKKDYISQEGRVIDPSDARKITTSEGQSYG CCHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHCCCCCEECCCCCCEEECCCCCCCC MFFALAANDRVAFDNILDWTQNNLAQGSLKERLPAWLWGKKENSKWEVLDSNSASDGDVW EEEEEECCCCCHHHHHHHHHHCCHHCCCHHHHCCHHCCCCCCCCCEEEEECCCCCCCCEE MAWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLGSMLLPGKVGFAEDNSWRFNP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCEEECC SYLPPTLAQYFTRFGAPWTTLRETNQRLLLETAPKGFSPDWVRYEKDKGWQLKAEKTLIS CCCCHHHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCCCCCEEEECCCCCEEEHHHHHHH SYDAIRVYMWVGMMPDSDPQKARMLNRFKPMATFTEKNGYPPEKVDVATGKAQGKGPVGF HHHHEEEEEEEECCCCCCHHHHHHHHHHCCHHHHHCCCCCCCCCEEECCCCCCCCCCCCH SAAMLPFLQNRDAQAVQRQRVADNFPGSDAYYNYVLTLFGQGWDQHRFRFSTKGELLPDW HHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHH GQECANSH HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]