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The map label for this gene is hdeB

Identifier: 218697218

GI number: 218697218

Start: 4021074

End: 4021400

Strand: Reverse

Name: hdeB

Synonym: EC55989_3952

Alternate gene names: 218697218

Gene position: 4021400-4021074 (Counterclockwise)

Preceding gene: 218697219

Following gene: 218697217

Centisome position: 78.01

GC content: 40.37

Gene sequence:

>327_bases
ATGAATATTTCATCTCTCCGTAAAGCGTTTATTTTTATGGGCGCTGTAGCGGCTTTGTCACTGGTGAACGCACAATCTGC
GCTGGCAGCCAATGAATCCGCTAAAGATATGACCTGCCAGGAATTTATTGATCTGAATCCAAAAGCAATGACCCCGGTTG
CATGGTGGATGCTGCATGAAGAAACAGTATATAAAGGTGGCGATACCGTTACTTTAAATGAAACCGATCTCACTCAAATT
CCTAAAGTGATCGAATACTGTAAGAAAAACCCGCAGAAAAATTTGTATACCTTCAAAAATCAAGCATCTAATGACTTGCC
GAATTAA

Upstream 100 bases:

>100_bases
ACATCGTACTTCCTTGCATATTGAACAGGCCGGAATATCTTCTTTAAAAGCAGCTATTCCTCCTGTTCATATATAATCTC
TATATTGAATGGGTTACAAA

Downstream 100 bases:

>100_bases
TGAGGTACAAGTAAAAAGGAGTAGCAAGTTGAGCCATCTTGCTGCTCCTTTTTGCATTTTTATATGACAGCAGAATTTAT
TATACGTCTTATACTCGCGG

Product: acid-resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MNISSLRKAFIFMGAVAALSLVNAQSALAANESAKDMTCQEFIDLNPKAMTPVAWWMLHEETVYKGGDTVTLNETDLTQI
PKVIEYCKKNPQKNLYTFKNQASNDLPN

Sequences:

>Translated_108_residues
MNISSLRKAFIFMGAVAALSLVNAQSALAANESAKDMTCQEFIDLNPKAMTPVAWWMLHEETVYKGGDTVTLNETDLTQI
PKVIEYCKKNPQKNLYTFKNQASNDLPN
>Mature_108_residues
MNISSLRKAFIFMGAVAALSLVNAQSALAANESAKDMTCQEFIDLNPKAMTPVAWWMLHEETVYKGGDTVTLNETDLTQI
PKVIEYCKKNPQKNLYTFKNQASNDLPN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082279, Length=108, Percent_Identity=100, Blast_Score=226, Evalue=3e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): HDEB_ECOL6 (P0AET3)

Other databases:

- EMBL:   AE014075
- RefSeq:   NP_756182.1
- ProteinModelPortal:   P0AET3
- EnsemblBacteria:   EBESCT00000044017
- GeneID:   1037197
- GenomeReviews:   AE014075_GR
- KEGG:   ecc:c4320
- GeneTree:   EBGT00050000009058
- HOGENOM:   HBG758235
- OMA:   SMTPVAF
- ProtClustDB:   PRK11566
- InterPro:   IPR010486
- Gene3D:   G3DSA:1.10.890.10

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12043; Mature: 12043

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNISSLRKAFIFMGAVAALSLVNAQSALAANESAKDMTCQEFIDLNPKAMTPVAWWMLHE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHH
ETVYKGGDTVTLNETDLTQIPKVIEYCKKNPQKNLYTFKNQASNDLPN
HHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCC
>Mature Secondary Structure
MNISSLRKAFIFMGAVAALSLVNAQSALAANESAKDMTCQEFIDLNPKAMTPVAWWMLHE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHH
ETVYKGGDTVTLNETDLTQIPKVIEYCKKNPQKNLYTFKNQASNDLPN
HHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157