| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is 218697180
Identifier: 218697180
GI number: 218697180
Start: 3979748
End: 3980194
Strand: Reverse
Name: 218697180
Synonym: EC55989_3911
Alternate gene names: NA
Gene position: 3980194-3979748 (Counterclockwise)
Preceding gene: 218697181
Following gene: 218697179
Centisome position: 77.21
GC content: 49.66
Gene sequence:
>447_bases GTGAGTATGAAAAAAGTGGTTCTGATGGCGCTGGCTCTCGGCCTTTCACTGCCCGCGATGGCGAGTGAAAAAGTGATTGA TATGTACAAATCTGAAAACTGTGGCTGTTGTTCCCTGTGGGGCAAGGCGATGGAAAAAGACGGGTTTGAAGTACGAACTC ACGTCATGAATGATCAGGCGCTGTCAGCCCTGAAAGAAAAGCATGCTATTCCTGCAGGACTGCGAAGTTGTCATACCGCG GTTGCCGGTAATTTGATCATTGAAGGCCATGTGCCTGCGACAACGATACATAAGGCAATGCAGTCTGGTTCAGGTATATA CGGTCTCGCCACCCCCGGTATGCCAGCAGGAAGTCCTGGAATGGAGATGGGAGCCCGAAAAGAGGCTTACGATGTTATCG CATTCTCACCGGATGGAAGTAAAAAAGTCTTCCAGCGAATCGAATAG
Upstream 100 bases:
>100_bases ATAAAAAAAGCGTGTCCTGAACCTGAAAGGGCACCCCCTGTGGGTGTCCTTCTTTACTGATTCACCCTGACGTCAGGGTT TAAATCGATAATATACAGAG
Downstream 100 bases:
>100_bases TCAGCGGAACGGCTGATAACGGGACGCCGGTAGCAGGCACTCCTGTGCCGGCGATATTCGTGGTAATCGCATCCATGACA TACCCTGAAGACAGAAGATG
Product: conserved hypothetical protein; putative exported protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MSMKKVVLMALALGLSLPAMASEKVIDMYKSENCGCCSLWGKAMEKDGFEVRTHVMNDQALSALKEKHAIPAGLRSCHTA VAGNLIIEGHVPATTIHKAMQSGSGIYGLATPGMPAGSPGMEMGARKEAYDVIAFSPDGSKKVFQRIE
Sequences:
>Translated_148_residues MSMKKVVLMALALGLSLPAMASEKVIDMYKSENCGCCSLWGKAMEKDGFEVRTHVMNDQALSALKEKHAIPAGLRSCHTA VAGNLIIEGHVPATTIHKAMQSGSGIYGLATPGMPAGSPGMEMGARKEAYDVIAFSPDGSKKVFQRIE >Mature_147_residues SMKKVVLMALALGLSLPAMASEKVIDMYKSENCGCCSLWGKAMEKDGFEVRTHVMNDQALSALKEKHAIPAGLRSCHTAV AGNLIIEGHVPATTIHKAMQSGSGIYGLATPGMPAGSPGMEMGARKEAYDVIAFSPDGSKKVFQRIE
Specific function: Unknown
COG id: COG3019
COG function: function code R; Predicted metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15712; Mature: 15580
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 7.4 %Met (Translated Protein) 10.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 6.8 %Met (Mature Protein) 9.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMKKVVLMALALGLSLPAMASEKVIDMYKSENCGCCSLWGKAMEKDGFEVRTHVMNDQA CCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHCHHH LSALKEKHAIPAGLRSCHTAVAGNLIIEGHVPATTIHKAMQSGSGIYGLATPGMPAGSPG HHHHHHHCCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCCCCC MEMGARKEAYDVIAFSPDGSKKVFQRIE CCCCCCCCCCEEEEECCCCHHHHHHHCC >Mature Secondary Structure SMKKVVLMALALGLSLPAMASEKVIDMYKSENCGCCSLWGKAMEKDGFEVRTHVMNDQA CHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHCHHH LSALKEKHAIPAGLRSCHTAVAGNLIIEGHVPATTIHKAMQSGSGIYGLATPGMPAGSPG HHHHHHHCCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCCCCC MEMGARKEAYDVIAFSPDGSKKVFQRIE CCCCCCCCCCEEEEECCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA