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The map label for this gene is yraL

Identifier: 218696853

GI number: 218696853

Start: 3649746

End: 3650606

Strand: Reverse

Name: yraL

Synonym: EC55989_3566

Alternate gene names: 218696853

Gene position: 3650606-3649746 (Counterclockwise)

Preceding gene: 218696858

Following gene: 218696836

Centisome position: 70.82

GC content: 54.36

Gene sequence:

>861_bases
ATGAAACAACACCAATCGGCGGATAATTCTCAGGGCCAGCTTTACATTGTACCGACGCCAATCGGCAATCTGGCGGATAT
CACCCAGCGTGCGTTAGAGGTATTACAGGCCGTTGATCTGATTGCCGCCGAGGATACTCGTCACACCGGTTTATTGCTGC
AACATTTTGGGATTAATGCCCGGTTGTTTGCGCTGCACGACCATAACGAACAACAAAAAGCCGAAACGCTGCTGGCGAAG
CTGCAAGAAGGGCAGAACATTGCGCTGGTTTCCGATGCCGGAACGCCGCTAATTAACGATCCTGGCTACCATCTGGTGCG
TACCTGCCGTGAAGCGGGGATTTGCGTGGTGCCGCTACCCGGGCCGTGTGCTGCTATCACTGCGTTAAGCGCCGCGGGTT
TACCCTCTGACCGTTTCTGTTACGAAGGCTTTTTACCTGCCAAATCAAAAGGCCGCCGTGATGCGCTAAAAGCCATTGAA
GCGGAGCCGCGCACGCTGATTTTTTATGAATCCACCCACCGTCTGTTAGATAGCCTGGAAGATATCGTTGCGGTATTAGG
CGAATCCCGCTACGTGGTTCTGGCGCGTGAGCTGACCAAAACCTGGGAAACCATTCACGGCGCGCCCGTTGGCGAGCTGC
TGGCGTGGGTAAAAGAAGATGAAAACCGTCGCAAAGGCGAAATGGTGCTGATTATCGAAGGTCATAAAGCACAGGAAGAA
GACTTACCCGCCGATGCCCTGCGCACGCTGGCGCTGCTACAGGCAGAACTGCCGTTGAAAAAAGCGGCGGCGCTGGCGGC
AGAAATTCACGGCGTGAAGAAAAATGCGCTGTATAAGTATGCGCTGGAGCAGCAGGGGTAA

Upstream 100 bases:

>100_bases
GCGCGGCTTTCAAACGAGAAAATGTTGAGGGTACCATAATGTATCCAGTGATATTTTTTTACGCAATGCTCAATATTAAA
TCGGCAATACGGACGACACA

Downstream 100 bases:

>100_bases
GAGTGCCGAAGCGTTGCGTTAATCAAAACGCAACGTCTTCTTTTACCGCACGATGACGGTAATGGTGGCGGTGCCCTGAA
ATTTTCCTGTTTCCAGCTCA

Product: putative methyltransferase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MKQHQSADNSQGQLYIVPTPIGNLADITQRALEVLQAVDLIAAEDTRHTGLLLQHFGINARLFALHDHNEQQKAETLLAK
LQEGQNIALVSDAGTPLINDPGYHLVRTCREAGICVVPLPGPCAAITALSAAGLPSDRFCYEGFLPAKSKGRRDALKAIE
AEPRTLIFYESTHRLLDSLEDIVAVLGESRYVVLARELTKTWETIHGAPVGELLAWVKEDENRRKGEMVLIIEGHKAQEE
DLPADALRTLALLQAELPLKKAAALAAEIHGVKKNALYKYALEQQG

Sequences:

>Translated_286_residues
MKQHQSADNSQGQLYIVPTPIGNLADITQRALEVLQAVDLIAAEDTRHTGLLLQHFGINARLFALHDHNEQQKAETLLAK
LQEGQNIALVSDAGTPLINDPGYHLVRTCREAGICVVPLPGPCAAITALSAAGLPSDRFCYEGFLPAKSKGRRDALKAIE
AEPRTLIFYESTHRLLDSLEDIVAVLGESRYVVLARELTKTWETIHGAPVGELLAWVKEDENRRKGEMVLIIEGHKAQEE
DLPADALRTLALLQAELPLKKAAALAAEIHGVKKNALYKYALEQQG
>Mature_286_residues
MKQHQSADNSQGQLYIVPTPIGNLADITQRALEVLQAVDLIAAEDTRHTGLLLQHFGINARLFALHDHNEQQKAETLLAK
LQEGQNIALVSDAGTPLINDPGYHLVRTCREAGICVVPLPGPCAAITALSAAGLPSDRFCYEGFLPAKSKGRRDALKAIE
AEPRTLIFYESTHRLLDSLEDIVAVLGESRYVVLARELTKTWETIHGAPVGELLAWVKEDENRRKGEMVLIIEGHKAQEE
DLPADALRTLALLQAELPLKKAAALAAEIHGVKKNALYKYALEQQG

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=286, Percent_Identity=99.3006993006993, Blast_Score=576, Evalue=1e-166,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 31309; Mature: 31309

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQHQSADNSQGQLYIVPTPIGNLADITQRALEVLQAVDLIAAEDTRHTGLLLQHFGINA
CCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCE
RLFALHDHNEQQKAETLLAKLQEGQNIALVSDAGTPLINDPGYHLVRTCREAGICVVPLP
EEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCEEEEECC
GPCAAITALSAAGLPSDRFCYEGFLPAKSKGRRDALKAIEAEPRTLIFYESTHRLLDSLE
CCHHHHHHHHHCCCCCCCCHHCCCCCCCCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHH
DIVAVLGESRYVVLARELTKTWETIHGAPVGELLAWVKEDENRRKGEMVLIIEGHKAQEE
HHHHHHCCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC
DLPADALRTLALLQAELPLKKAAALAAEIHGVKKNALYKYALEQQG
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MKQHQSADNSQGQLYIVPTPIGNLADITQRALEVLQAVDLIAAEDTRHTGLLLQHFGINA
CCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCE
RLFALHDHNEQQKAETLLAKLQEGQNIALVSDAGTPLINDPGYHLVRTCREAGICVVPLP
EEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCEEEEECC
GPCAAITALSAAGLPSDRFCYEGFLPAKSKGRRDALKAIEAEPRTLIFYESTHRLLDSLE
CCHHHHHHHHHCCCCCCCCHHCCCCCCCCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHH
DIVAVLGESRYVVLARELTKTWETIHGAPVGELLAWVKEDENRRKGEMVLIIEGHKAQEE
HHHHHHCCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC
DLPADALRTLALLQAELPLKKAAALAAEIHGVKKNALYKYALEQQG
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]