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The map label for this gene is tdcR

Identifier: 218696825

GI number: 218696825

Start: 3620818

End: 3621174

Strand: Direct

Name: tdcR

Synonym: EC55989_3536

Alternate gene names: 218696825

Gene position: 3620818-3621174 (Clockwise)

Preceding gene: 218696815

Following gene: 218696826

Centisome position: 70.24

GC content: 31.09

Gene sequence:

>357_bases
TTGTCAAAAAAAATGACGGGGATAACCATATTTTATGGCGATAACATCATTCGTTATGTGGTTAATATAAAAAAGGGGCT
GAGACCATATTTCAAGCAATTACCGGATAATTACCAGGCAAAATTTGAGTTAAATTTAATGAGCAAGTTCTCAAATTTTA
TTATAAATAAACCATTTTCAGCGATAAATACTGCGGCACGTCACATTTTTTCACGCTATTTGTTGGAGAACAAACATTTA
TTTTATCAATATTTTAAAATTTCGAATACAGGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGA
CAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAA

Upstream 100 bases:

>100_bases
ACAAATTAACTTTCAATACTTTCCATGGTATCGTTACGCAAATTAAATACCTTTAAATATCAACAAGTTAAAGTATAAAA
ATCAGCATAAACCCTGATTT

Downstream 100 bases:

>100_bases
ATTCTTCTCCCCTCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGGTCGCCGCGATAAG
GTCAGACAAAGACAACAAGG

Product: DNA-binding transcriptional activator TdcR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MSKKMTGITIFYGDNIIRYVVNIKKGLRPYFKQLPDNYQAKFELNLMSKFSNFIINKPFSAINTAARHIFSRYLLENKHL
FYQYFKISNTGIDHLEQLINVNFFSSDRTSFCECNRFP

Sequences:

>Translated_118_residues
MSKKMTGITIFYGDNIIRYVVNIKKGLRPYFKQLPDNYQAKFELNLMSKFSNFIINKPFSAINTAARHIFSRYLLENKHL
FYQYFKISNTGIDHLEQLINVNFFSSDRTSFCECNRFP
>Mature_117_residues
SKKMTGITIFYGDNIIRYVVNIKKGLRPYFKQLPDNYQAKFELNLMSKFSNFIINKPFSAINTAARHIFSRYLLENKHLF
YQYFKISNTGIDHLEQLINVNFFSSDRTSFCECNRFP

Specific function: Probable trans-acting positive activator for the tdc operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082214, Length=72, Percent_Identity=94.4444444444444, Blast_Score=139, Evalue=6e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14026; Mature: 13895

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKMTGITIFYGDNIIRYVVNIKKGLRPYFKQLPDNYQAKFELNLMSKFSNFIINKPFS
CCCCCCEEEEEECCCHHHHHHHHHHCCHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCHH
AINTAARHIFSRYLLENKHLFYQYFKISNTGIDHLEQLINVNFFSSDRTSFCECNRFP
HHHHHHHHHHHHHHHCCCHHEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SKKMTGITIFYGDNIIRYVVNIKKGLRPYFKQLPDNYQAKFELNLMSKFSNFIINKPFS
CCCCCEEEEEECCCHHHHHHHHHHCCHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCHH
AINTAARHIFSRYLLENKHLFYQYFKISNTGIDHLEQLINVNFFSSDRTSFCECNRFP
HHHHHHHHHHHHHHHCCCHHEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2660107; 2573820; 9278503; 7928991 [H]