| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is yqjB
Identifier: 218696804
GI number: 218696804
Start: 3602089
End: 3602472
Strand: Direct
Name: yqjB
Synonym: EC55989_3514
Alternate gene names: 218696804
Gene position: 3602089-3602472 (Clockwise)
Preceding gene: 218696803
Following gene: 218696805
Centisome position: 69.88
GC content: 53.65
Gene sequence:
>384_bases ATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCACTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGC CTGGTCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCATGCCGTTCATCAAGGCACAACGATGCCAGACGGTTTTT CGATCTGGCATCACCTTGACGCTCATGGCATTCCTTTCAAAAGTATCACCCCCAAAAACGACACTCTGTTAATTACATTT GACTCCAGCGACCAGAGCGCCGCCGCAAAAGCGGTCCTCGACAGAACATTGCCCCATGGCTACATCATTGCGCAGCAGGA CAATAACAGTCAGGCTATGCAGTGGCTGACCCGGTTACGGGATAACTCTCATCGCTTCGGATAA
Upstream 100 bases:
>100_bases GTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAAT ATGGAAATCGGGGGTAAGGG
Downstream 100 bases:
>100_bases CTTCCTGTTATCCGAAACATATCACTCACTTTGGTGATTTCACCGTAACTGTCTATGATTAATGAGGCGGTGGTTAACAC TACCGCTTCGTTGTCTGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MQIPRMSLRQLAWSGTVLLLVGTLLLAWSAVRQQESTLAIHAVHQGTTMPDGFSIWHHLDAHGIPFKSITPKNDTLLITF DSSDQSAAAKAVLDRTLPHGYIIAQQDNNSQAMQWLTRLRDNSHRFG
Sequences:
>Translated_127_residues MQIPRMSLRQLAWSGTVLLLVGTLLLAWSAVRQQESTLAIHAVHQGTTMPDGFSIWHHLDAHGIPFKSITPKNDTLLITF DSSDQSAAAKAVLDRTLPHGYIIAQQDNNSQAMQWLTRLRDNSHRFG >Mature_127_residues MQIPRMSLRQLAWSGTVLLLVGTLLLAWSAVRQQESTLAIHAVHQGTTMPDGFSIWHHLDAHGIPFKSITPKNDTLLITF DSSDQSAAAKAVLDRTLPHGYIIAQQDNNSQAMQWLTRLRDNSHRFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789482, Length=127, Percent_Identity=98.4251968503937, Blast_Score=255, Evalue=6e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14183; Mature: 14183
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIPRMSLRQLAWSGTVLLLVGTLLLAWSAVRQQESTLAIHAVHQGTTMPDGFSIWHHLD CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHCCC AHGIPFKSITPKNDTLLITFDSSDQSAAAKAVLDRTLPHGYIIAQQDNNSQAMQWLTRLR CCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHH DNSHRFG CCCCCCC >Mature Secondary Structure MQIPRMSLRQLAWSGTVLLLVGTLLLAWSAVRQQESTLAIHAVHQGTTMPDGFSIWHHLD CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHCCC AHGIPFKSITPKNDTLLITFDSSDQSAAAKAVLDRTLPHGYIIAQQDNNSQAMQWLTRLR CCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHH DNSHRFG CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]