Definition | Escherichia coli 55989, complete genome. |
---|---|
Accession | NC_011748 |
Length | 5,154,862 |
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The map label for this gene is yghG
Identifier: 218696675
GI number: 218696675
Start: 3460978
End: 3461388
Strand: Reverse
Name: yghG
Synonym: EC55989_3380
Alternate gene names: 218696675
Gene position: 3461388-3460978 (Counterclockwise)
Preceding gene: 218696676
Following gene: 218696674
Centisome position: 67.15
GC content: 44.28
Gene sequence:
>411_bases ATGTCGATAAAACAAATGCCAGGGAGGGTATTAATATCGCTATTGTTGAGCGTTACAGGATTATTAAGTGGCTGTGCCAG CCATAATGAAAATGCCAGTTTACTGGCGAAAAAACAGGCGCAAAATATCAGCCAAAACCTGCCGATTAAATCTGCGGGAT ATACCTTAGTGCTGGCACAAAGTAGCGGCACGACGGTAAAAATGACCATTATCAGCGAAGCGGGGACTCAGACCACGCAG ACGCCTGACGCCTTTTTAACCAGCTATCAACGACAAATGTGCGCTGACCCAACGGTGAAATTAATGATTACCGAGGGAAT TAATTACAGCATAACGATTAATGATACACGTACAGGTAACCAGTATCAGCGGAAACTGGATCGTACCACCTGTGGAATAG TCAAAGCATAA
Upstream 100 bases:
>100_bases GTATAGCAACAATTTATCTACAGGCATTGTTTTAATGATAACAACGTCATTATCAAAGTGACATTTTAACTCTTATTAAT AACCTTAGAGATTATTTACC
Downstream 100 bases:
>100_bases CGTCGGGTAGATATAAATTGGCGCGGGTTGTTTTTCGTGACGCACGAATTTATCTCATTCAATGGCTGACAAAAATTCGT CACACTCTTAACCAGAGACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MSIKQMPGRVLISLLLSVTGLLSGCASHNENASLLAKKQAQNISQNLPIKSAGYTLVLAQSSGTTVKMTIISEAGTQTTQ TPDAFLTSYQRQMCADPTVKLMITEGINYSITINDTRTGNQYQRKLDRTTCGIVKA
Sequences:
>Translated_136_residues MSIKQMPGRVLISLLLSVTGLLSGCASHNENASLLAKKQAQNISQNLPIKSAGYTLVLAQSSGTTVKMTIISEAGTQTTQ TPDAFLTSYQRQMCADPTVKLMITEGINYSITINDTRTGNQYQRKLDRTTCGIVKA >Mature_135_residues SIKQMPGRVLISLLLSVTGLLSGCASHNENASLLAKKQAQNISQNLPIKSAGYTLVLAQSSGTTVKMTIISEAGTQTTQT PDAFLTSYQRQMCADPTVKLMITEGINYSITINDTRTGNQYQRKLDRTTCGIVKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential)
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789342, Length=136, Percent_Identity=100, Blast_Score=276, Evalue=3e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YGHG_ECOLI (Q46835)
Other databases:
- EMBL: U28377 - EMBL: U00096 - EMBL: AP009048 - PIR: A65083 - RefSeq: AP_003526.1 - RefSeq: NP_417445.1 - STRING: Q46835 - EnsemblBacteria: EBESCT00000001395 - EnsemblBacteria: EBESCT00000015415 - GeneID: 947470 - GenomeReviews: AP009048_GR - GenomeReviews: U00096_GR - KEGG: ecj:JW2938 - KEGG: eco:b2971 - EchoBASE: EB2815 - EcoGene: EG12991 - GeneTree: EBGT00050000010238 - HOGENOM: HBG467971 - OMA: GHNENAS - ProtClustDB: CLSK891790 - BioCyc: EcoCyc:G7538-MONOMER - Genevestigator: Q46835 - InterPro: IPR016502 - PIRSF: PIRSF007010
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14670; Mature: 14539
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKQMPGRVLISLLLSVTGLLSGCASHNENASLLAKKQAQNISQNLPIKSAGYTLVLAQ CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEE SSGTTVKMTIISEAGTQTTQTPDAFLTSYQRQMCADPTVKLMITEGINYSITINDTRTGN CCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCCH QYQRKLDRTTCGIVKA HHHHHHHHHHCCEECC >Mature Secondary Structure SIKQMPGRVLISLLLSVTGLLSGCASHNENASLLAKKQAQNISQNLPIKSAGYTLVLAQ CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEE SSGTTVKMTIISEAGTQTTQTPDAFLTSYQRQMCADPTVKLMITEGINYSITINDTRTGN CCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCCH QYQRKLDRTTCGIVKA HHHHHHHHHHCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503