Definition | Escherichia coli 55989, complete genome. |
---|---|
Accession | NC_011748 |
Length | 5,154,862 |
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The map label for this gene is exeH [H]
Identifier: 218696669
GI number: 218696669
Start: 3454156
End: 3454719
Strand: Reverse
Name: exeH [H]
Synonym: EC55989_3374
Alternate gene names: 218696669
Gene position: 3454719-3454156 (Counterclockwise)
Preceding gene: 218696670
Following gene: 218696668
Centisome position: 67.02
GC content: 54.26
Gene sequence:
>564_bases GTGCCTGAACGCGGATTCACACTTCTGGAAATCATGCTGGTGATTTTTCTTATCGGCCTTGCCAGTGCGGGCGTGGTACA GACTTTTGCGACCGATTCTGAATCGCCCGCGAAAAAAGCGGCGCAGGATTTTCTGACTCGCTTTGCGCAGTTTAAGGACA GGGCAGTGATCGAAGGGAAAACACTCGGTGTGCTAATCGACCCGCCTGGCTACCAGTTTATGCAGCGTCGTCAGGGGCAG TGGTCGCCCGTTTCCTCGACCCGGTTATCGGCACAGGTTACGGTGCCGAAACAGGTGCAGATGCTGTTACAACCCGGAAG TGATATCTGGCAGAAGGAATATGCGCTGGAGCTGCAACGTCGTCGACTGACGCTGCACGATATTGAACTTGAGCTGCAAA AAGAGGCGAAAAAGAAGACGCCGCAGATCCGTTTTTCGCCTTTTGAACCCGCCACGCCGTTTACGTTGCGCTTCTACTCG GCGGCGCAAAACGCATGTTGGGCGGTAAAGCTGGCACACGATGGCGCGTTATCCCTCAATCAATGTGATGAGAGGATGCC ATGA
Upstream 100 bases:
>100_bases GCTGTTTGATGTTTATACCCTGGGGGCGGATGGTCAGGAAAACGGGGAAGGCGCTGGCGCAGATATCGGTAACTGGAATT TGCAGGAGTTTCAGTAAGCA
Downstream 100 bases:
>100_bases AGCGCGGATTTACCTTGCTGGAAGTGATGCTCGCGCTGGCGATTTTTGCGCTGGCTGCCACGGCGGTGTTACAGATTGCC AGCGGTGCGCTGAGTAATCA
Product: conserved hypothetical protein; putative exported protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MPERGFTLLEIMLVIFLIGLASAGVVQTFATDSESPAKKAAQDFLTRFAQFKDRAVIEGKTLGVLIDPPGYQFMQRRQGQ WSPVSSTRLSAQVTVPKQVQMLLQPGSDIWQKEYALELQRRRLTLHDIELELQKEAKKKTPQIRFSPFEPATPFTLRFYS AAQNACWAVKLAHDGALSLNQCDERMP
Sequences:
>Translated_187_residues MPERGFTLLEIMLVIFLIGLASAGVVQTFATDSESPAKKAAQDFLTRFAQFKDRAVIEGKTLGVLIDPPGYQFMQRRQGQ WSPVSSTRLSAQVTVPKQVQMLLQPGSDIWQKEYALELQRRRLTLHDIELELQKEAKKKTPQIRFSPFEPATPFTLRFYS AAQNACWAVKLAHDGALSLNQCDERMP >Mature_186_residues PERGFTLLEIMLVIFLIGLASAGVVQTFATDSESPAKKAAQDFLTRFAQFKDRAVIEGKTLGVLIDPPGYQFMQRRQGQW SPVSSTRLSAQVTVPKQVQMLLQPGSDIWQKEYALELQRRRLTLHDIELELQKEAKKKTPQIRFSPFEPATPFTLRFYSA AQNACWAVKLAHDGALSLNQCDERMP
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP H family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002416 - InterPro: IPR012902 - InterPro: IPR001120 - InterPro: IPR022346 [H]
Pfam domain/function: PF12019 GspH [H]
EC number: NA
Molecular weight: Translated: 21155; Mature: 21024
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPERGFTLLEIMLVIFLIGLASAGVVQTFATDSESPAKKAAQDFLTRFAQFKDRAVIEGK CCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEECCC TLGVLIDPPGYQFMQRRQGQWSPVSSTRLSAQVTVPKQVQMLLQPGSDIWQKEYALELQR EEEEEECCCCHHHHHHCCCCCCCCCCCEEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHH RRLTLHDIELELQKEAKKKTPQIRFSPFEPATPFTLRFYSAAQNACWAVKLAHDGALSLN HCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEHHCCCCEEEEEEECCCCCCHH QCDERMP HHHCCCC >Mature Secondary Structure PERGFTLLEIMLVIFLIGLASAGVVQTFATDSESPAKKAAQDFLTRFAQFKDRAVIEGK CCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEECCC TLGVLIDPPGYQFMQRRQGQWSPVSSTRLSAQVTVPKQVQMLLQPGSDIWQKEYALELQR EEEEEECCCCHHHHHHCCCCCCCCCCCEEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHH RRLTLHDIELELQKEAKKKTPQIRFSPFEPATPFTLRFYSAAQNACWAVKLAHDGALSLN HCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEHHCCCCEEEEEEECCCCCCHH QCDERMP HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8407845 [H]