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The map label for this gene is 218696637

Identifier: 218696637

GI number: 218696637

Start: 3425720

End: 3427057

Strand: Reverse

Name: 218696637

Synonym: EC55989_3338

Alternate gene names: NA

Gene position: 3427057-3425720 (Counterclockwise)

Preceding gene: 218696638

Following gene: 218696636

Centisome position: 66.48

GC content: 56.05

Gene sequence:

>1338_bases
ATGAAGATTTATCGCCCACTATGGGAAGACGGGGCTTTTCTGATGCCCCAGCAGTTTCAGCAGCAGGCTGCCTGGGATGT
TCATCTGGCAGACAGCGTTGCCAGAATGGGGCTGGCGCATCCATGGGGCGTGGTGGCTGCAGAGTTTGATGACTCTCTGT
TACCGCTTTCACGGTTGAATGCCACCCGTCTGATTGTTCGTTTCCCGGACGGAACGCTTATTGATACGGAACGCGCGGAT
AATCTGCCTCCGGTCTGTGATTTATCGACGGTTTCTGATCGTTCCCTGGTGGATATTGTGCTGGCACTACCGTTACTGAA
TGCTAACGGTGGCAACCTTGATAATGGCAGTGAGAGCGAGCGTCCGCGTCGCTGGAAATCAGAAAGGGTGAATGTGCAGG
AGCTGGCCGGGCATGAGCAAAGCGAAGTGGCGGTATTGCGGCATAACCTGACTCTGCGCATGGCTCATCAGGAAAATGCT
GCCTGGCTGACCTGTCCCGTTACCCGTCTTGTTCGTGATGCACAGGGACAGTGGTGCAGGGACCCGCGTTTTATTCCCCC
TCTGCTGACGCTGTCTGCCGGTCCTTCGCTGATGACTGAACTTGCGGAGTTGCTTCATCACCTGCAGGCGCGTCGCCAGC
GACTGATGTCCATGCGTCGGGAGAACAATGCCCGTCTTGCGGATTTTGCTGTGGCGGACGTGTCGTTGTTCTGGTTGCTG
AATGCCCTGAACAGTGCGGAGCCTGTTCTGAAAGAGTTGCTTGACATGCCTTACCGCCACCCGGAACTGTTGTACAGGGA
GCTTGCCCGGCTGGCAGGCTCCCTGCTCACATTCTCGCTTGAGCATAATGTGGATGCGGTTCCGGCATACCATCATGAAA
CACCTGAAAATGTTTTCCCACCATTGCTTTCTTTGCTGAATCGGCTGCTGGAGGCAAGCCTGCCTTCCCGTGTGGTTTTC
ATTGAACTGAAACAAAAGGGTGTGATGTGGGAGGGGGCATTACATGATGCGCGTCTGCGCGAAGGGGCTGATTTCTGGCT
TTCAGTGCGCTCTTCCATGCCCGGGCATGAACTGCAGACGAAGTTTCCGCAGCTATGCAAAGCCGGGAGCCCCGATGATG
TGTCTGAGGTGGTGAATGTGGCGCTGAGCGGGGTCATTATCCGTCCGGTTACGCATGTACCGGCGGCCATTCCGCTCCGG
CTGGAAAACCAGTATTTCGCGCTGGATTTAAGTACGGATGCGGCCCGGGCGATGCTGGACGCGGGGCGTTGTACTTTCTA
CACCCCGGCATCGCTGGGAGATGTGAAACTGGAACTTTTTGCGGTGCTGCGGACATGA

Upstream 100 bases:

>100_bases
ACTCTACGCCGTACCGCATTTCCAGGTAGAAGGTATGGACGTCAGCCTGTCACTGGTTTCGCAGATGCCGAAGGCAAAAG
CGTAAGGCAGGTGTCGGGAA

Downstream 100 bases:

>100_bases
ATAAACCTGTTATCTCCCGGGCTGAACAGATTTTTTATCCCGGCTGGCTGATGGTCAGCCAGCTGCGCAGCGGGCAACCG
GTTGAGGATGGTAAGGCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Protein ImpJ/VasE; Conserved Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein EvpM; Type VI Secretion System Protein ImpJ; Type VI Secretion System Core Protein; T6ss M; Type VI Secretion Protein VasE; Temperature-Dependent Protein Secretion ImpJ

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MKIYRPLWEDGAFLMPQQFQQQAAWDVHLADSVARMGLAHPWGVVAAEFDDSLLPLSRLNATRLIVRFPDGTLIDTERAD
NLPPVCDLSTVSDRSLVDIVLALPLLNANGGNLDNGSESERPRRWKSERVNVQELAGHEQSEVAVLRHNLTLRMAHQENA
AWLTCPVTRLVRDAQGQWCRDPRFIPPLLTLSAGPSLMTELAELLHHLQARRQRLMSMRRENNARLADFAVADVSLFWLL
NALNSAEPVLKELLDMPYRHPELLYRELARLAGSLLTFSLEHNVDAVPAYHHETPENVFPPLLSLLNRLLEASLPSRVVF
IELKQKGVMWEGALHDARLREGADFWLSVRSSMPGHELQTKFPQLCKAGSPDDVSEVVNVALSGVIIRPVTHVPAAIPLR
LENQYFALDLSTDAARAMLDAGRCTFYTPASLGDVKLELFAVLRT

Sequences:

>Translated_445_residues
MKIYRPLWEDGAFLMPQQFQQQAAWDVHLADSVARMGLAHPWGVVAAEFDDSLLPLSRLNATRLIVRFPDGTLIDTERAD
NLPPVCDLSTVSDRSLVDIVLALPLLNANGGNLDNGSESERPRRWKSERVNVQELAGHEQSEVAVLRHNLTLRMAHQENA
AWLTCPVTRLVRDAQGQWCRDPRFIPPLLTLSAGPSLMTELAELLHHLQARRQRLMSMRRENNARLADFAVADVSLFWLL
NALNSAEPVLKELLDMPYRHPELLYRELARLAGSLLTFSLEHNVDAVPAYHHETPENVFPPLLSLLNRLLEASLPSRVVF
IELKQKGVMWEGALHDARLREGADFWLSVRSSMPGHELQTKFPQLCKAGSPDDVSEVVNVALSGVIIRPVTHVPAAIPLR
LENQYFALDLSTDAARAMLDAGRCTFYTPASLGDVKLELFAVLRT
>Mature_445_residues
MKIYRPLWEDGAFLMPQQFQQQAAWDVHLADSVARMGLAHPWGVVAAEFDDSLLPLSRLNATRLIVRFPDGTLIDTERAD
NLPPVCDLSTVSDRSLVDIVLALPLLNANGGNLDNGSESERPRRWKSERVNVQELAGHEQSEVAVLRHNLTLRMAHQENA
AWLTCPVTRLVRDAQGQWCRDPRFIPPLLTLSAGPSLMTELAELLHHLQARRQRLMSMRRENNARLADFAVADVSLFWLL
NALNSAEPVLKELLDMPYRHPELLYRELARLAGSLLTFSLEHNVDAVPAYHHETPENVFPPLLSLLNRLLEASLPSRVVF
IELKQKGVMWEGALHDARLREGADFWLSVRSSMPGHELQTKFPQLCKAGSPDDVSEVVNVALSGVIIRPVTHVPAAIPLR
LENQYFALDLSTDAARAMLDAGRCTFYTPASLGDVKLELFAVLRT

Specific function: Unknown

COG id: COG3522

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49870; Mature: 49870

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIYRPLWEDGAFLMPQQFQQQAAWDVHLADSVARMGLAHPWGVVAAEFDDSLLPLSRLN
CCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHCC
ATRLIVRFPDGTLIDTERADNLPPVCDLSTVSDRSLVDIVLALPLLNANGGNLDNGSESE
CEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
RPRRWKSERVNVQELAGHEQSEVAVLRHNLTLRMAHQENAAWLTCPVTRLVRDAQGQWCR
CCHHHHHHCCCHHHHHCCCHHHHHHEECCCEEEEEECCCCEEEECCHHHHHHHHCCCCCC
DPRFIPPLLTLSAGPSLMTELAELLHHLQARRQRLMSMRRENNARLADFAVADVSLFWLL
CCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
NALNSAEPVLKELLDMPYRHPELLYRELARLAGSLLTFSLEHNVDAVPAYHHETPENVFP
HHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHH
PLLSLLNRLLEASLPSRVVFIELKQKGVMWEGALHDARLREGADFWLSVRSSMPGHELQT
HHHHHHHHHHHCCCCCEEEEEEEECCCCEEECCHHHHHHHCCCHHHHEECCCCCCHHHHH
KFPQLCKAGSPDDVSEVVNVALSGVIIRPVTHVPAAIPLRLENQYFALDLSTDAARAMLD
HHHHHHCCCCCCCHHHHHHHHHCCEEEECHHHCCCEEEEEECCEEEEEEECCHHHHHHHH
AGRCTFYTPASLGDVKLELFAVLRT
CCCEEEECCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MKIYRPLWEDGAFLMPQQFQQQAAWDVHLADSVARMGLAHPWGVVAAEFDDSLLPLSRLN
CCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHCC
ATRLIVRFPDGTLIDTERADNLPPVCDLSTVSDRSLVDIVLALPLLNANGGNLDNGSESE
CEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
RPRRWKSERVNVQELAGHEQSEVAVLRHNLTLRMAHQENAAWLTCPVTRLVRDAQGQWCR
CCHHHHHHCCCHHHHHCCCHHHHHHEECCCEEEEEECCCCEEEECCHHHHHHHHCCCCCC
DPRFIPPLLTLSAGPSLMTELAELLHHLQARRQRLMSMRRENNARLADFAVADVSLFWLL
CCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
NALNSAEPVLKELLDMPYRHPELLYRELARLAGSLLTFSLEHNVDAVPAYHHETPENVFP
HHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHH
PLLSLLNRLLEASLPSRVVFIELKQKGVMWEGALHDARLREGADFWLSVRSSMPGHELQT
HHHHHHHHHHHCCCCCEEEEEEEECCCCEEECCHHHHHHHCCCHHHHEECCCCCCHHHHH
KFPQLCKAGSPDDVSEVVNVALSGVIIRPVTHVPAAIPLRLENQYFALDLSTDAARAMLD
HHHHHHCCCCCCCHHHHHHHHHCCEEEECHHHCCCEEEEEECCEEEEEEECCHHHHHHHH
AGRCTFYTPASLGDVKLELFAVLRT
CCCEEEECCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA