| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is 218696623
Identifier: 218696623
GI number: 218696623
Start: 3406082
End: 3406879
Strand: Reverse
Name: 218696623
Synonym: EC55989_3323
Alternate gene names: NA
Gene position: 3406879-3406082 (Counterclockwise)
Preceding gene: 218696624
Following gene: 218696622
Centisome position: 66.09
GC content: 39.6
Gene sequence:
>798_bases GTGACAGGGTGCGTCTGCAGCCTGATATGGAACATCTTCTTGCCGGGCTCATCGCCATTGATGCTGCCAGAGCTGCTGTG TTGTGCAATTCGGGAAGTTCATGAGATGTCTGTCATGCATTATCTTCAGGACAAAACATTTCAGGATATAGTCAAAAATC TGGTGTTACCGCTTCTGTCGGGCATTATTATTCCTCTTGTCAAATGGTTTGTGCAGCATTATGGCTATGCGCCGAATATC AGGAAATACAGATTTGAAAAAATTCCTGTATCTGAAAAGGAGTCCATTCTTGCCCGTATTGACAAACTGACAAAAGAACC AGCAACGAAAAATACACTGGTAAGAATAAAATACTGTTATGAACAGATGGGGATATATCTCCCGACGTGGTGTTGTAATA AGCTGATTTGTTTTATATCCGACAGAAATATCAGCTCAGTGGATAACAGACTGCATTGTTTTCTTAAATATTCTTTTGTC GGTATATTTTTAGATGGCAAATTTACTGTTAATACTCGTCGTGTGCATAAAAGTTACTGGATGATAGCAGTGTTTTCGGT GTTTTCTTTATGTGTTCAGTTTACGGGAGGGATACTTACAACCATGCCATTTCTGTCGGGGAGTAATACAGTTTTATTTA TGTTATTTTCTCTCGTTTATTTTATCATGATATTTCTGACAGTTATATTCACATGTAATCTGATTAATGAAATCCGGCTT GCCGTTCAGTTCGGGCGATTGTTTGAGGCATGGCTGAAGTCAGAGCGCGAGTCTCCGGAACAGTTAGCTTTATTCTGA
Upstream 100 bases:
>100_bases GCAACCCGGCTGACCCTGTCACAATGGGAACCTGAACTGGTATTTGAGGTAAAAGCCCGCCGCCTGAAACTGTTGCGTAT GAAGTCCGCAAAAACTGAAA
Downstream 100 bases:
>100_bases GAAGATAATGGACGATTTAACCCTGCGTTATTTTGACGCTGAAATGCGTTATCTGCGTGAAGCCGGAAAGGCGTTTGCAC AGGCTCATCCCGATCGGGCG
Product: hypothetical protein; putative membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MTGCVCSLIWNIFLPGSSPLMLPELLCCAIREVHEMSVMHYLQDKTFQDIVKNLVLPLLSGIIIPLVKWFVQHYGYAPNI RKYRFEKIPVSEKESILARIDKLTKEPATKNTLVRIKYCYEQMGIYLPTWCCNKLICFISDRNISSVDNRLHCFLKYSFV GIFLDGKFTVNTRRVHKSYWMIAVFSVFSLCVQFTGGILTTMPFLSGSNTVLFMLFSLVYFIMIFLTVIFTCNLINEIRL AVQFGRLFEAWLKSERESPEQLALF
Sequences:
>Translated_265_residues MTGCVCSLIWNIFLPGSSPLMLPELLCCAIREVHEMSVMHYLQDKTFQDIVKNLVLPLLSGIIIPLVKWFVQHYGYAPNI RKYRFEKIPVSEKESILARIDKLTKEPATKNTLVRIKYCYEQMGIYLPTWCCNKLICFISDRNISSVDNRLHCFLKYSFV GIFLDGKFTVNTRRVHKSYWMIAVFSVFSLCVQFTGGILTTMPFLSGSNTVLFMLFSLVYFIMIFLTVIFTCNLINEIRL AVQFGRLFEAWLKSERESPEQLALF >Mature_264_residues TGCVCSLIWNIFLPGSSPLMLPELLCCAIREVHEMSVMHYLQDKTFQDIVKNLVLPLLSGIIIPLVKWFVQHYGYAPNIR KYRFEKIPVSEKESILARIDKLTKEPATKNTLVRIKYCYEQMGIYLPTWCCNKLICFISDRNISSVDNRLHCFLKYSFVG IFLDGKFTVNTRRVHKSYWMIAVFSVFSLCVQFTGGILTTMPFLSGSNTVLFMLFSLVYFIMIFLTVIFTCNLINEIRLA VQFGRLFEAWLKSERESPEQLALF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30758; Mature: 30627
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGCVCSLIWNIFLPGSSPLMLPELLCCAIREVHEMSVMHYLQDKTFQDIVKNLVLPLLS CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH GIIIPLVKWFVQHYGYAPNIRKYRFEKIPVSEKESILARIDKLTKEPATKNTLVRIKYCY HHHHHHHHHHHHHCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH EQMGIYLPTWCCNKLICFISDRNISSVDNRLHCFLKYSFVGIFLDGKFTVNTRRVHKSYW HHCCCCCCHHHHHHHEEEEECCCHHHHHHHHHHHHEEEEEEEEECCEEEEHHHHHHHHHH MIAVFSVFSLCVQFTGGILTTMPFLSGSNTVLFMLFSLVYFIMIFLTVIFTCNLINEIRL HHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVQFGRLFEAWLKSERESPEQLALF HHHHHHHHHHHHHHCCCCCHHHCCC >Mature Secondary Structure TGCVCSLIWNIFLPGSSPLMLPELLCCAIREVHEMSVMHYLQDKTFQDIVKNLVLPLLS CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH GIIIPLVKWFVQHYGYAPNIRKYRFEKIPVSEKESILARIDKLTKEPATKNTLVRIKYCY HHHHHHHHHHHHHCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH EQMGIYLPTWCCNKLICFISDRNISSVDNRLHCFLKYSFVGIFLDGKFTVNTRRVHKSYW HHCCCCCCHHHHHHHEEEEECCCHHHHHHHHHHHHEEEEEEEEECCEEEEHHHHHHHHHH MIAVFSVFSLCVQFTGGILTTMPFLSGSNTVLFMLFSLVYFIMIFLTVIFTCNLINEIRL HHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVQFGRLFEAWLKSERESPEQLALF HHHHHHHHHHHHHHCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA