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The map label for this gene is ibrB

Identifier: 218696612

GI number: 218696612

Start: 3393065

End: 3393709

Strand: Reverse

Name: ibrB

Synonym: EC55989_3312

Alternate gene names: 218696612

Gene position: 3393709-3393065 (Counterclockwise)

Preceding gene: 218696613

Following gene: 218696611

Centisome position: 65.84

GC content: 52.56

Gene sequence:

>645_bases
ATGGGGGATTCTGTGACACCTGAAGTGGAGGTACTGAGTGACATGATTCGTCAGTACTTCAGCCAGGAACGACCAGAAGA
AGAGGCCATACAGGCCCTTAATCACCTGCGCAGGGTGCTTCATGAGGTCAGTCCTTTTGCACAGGAGCCTGTGGACTGTG
TGCTGTGGGTGAAAGCGGATGAGGTGGTGGCTAACGATTATAACCCCAATGTCATGGCGCCGGGTGAGAAGAAACTGCTG
AAACATTCACTGGAGCAGGATGGGTTCACGCAGCCTGTGGTTGTCTCGGAAGAGAAAGAGCATTATCTGGTCGTGGATGG
TTTTCATCGTCAGTTACTGGGCAGGGAAGCAGGTACGGGAGAACGTCTGAAGGGCTGGTTGCCAGTGACCTGTATTAATC
CGGAAAGAAAGGGACAGGCTTCACGTATTGCAGCGACCATTCGACATAACCGGGCCAGGGGTAAACACCAGATAACCTCT
ATGTCCGATATTGTCAGGGATCTTTCACGCCTGGGCTGGATGGATGAACGCATTGGCACTGAGCTGGGTATGGACCAGGA
TGAAGTACTGAGACTGAAACAGATTAGCGGGCTGACGGAATTGTTTCAGGAAGAGGACTTCAGCCCGGCATGGACGGTTC
GCTGA

Upstream 100 bases:

>100_bases
TCATAAAGAATGATTTCTGGTGCCGGACTCTCTCCTTCAGTCCGAACAAACCCCGGCACTATGAACGTTACCTGCAGCGT
ATGAAGGAAAGGAGGAATGA

Downstream 100 bases:

>100_bases
GACCGTCAGGTATGTATATTATTTCAGTGAGTTGATGTTTTGAGCAGGAAAAAGAGTCCCCCGGAAGTCGTGGAAGACAT
GGTTGCGCAAAAACTGGAGG

Product: transcriptional regulator IbrB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MGDSVTPEVEVLSDMIRQYFSQERPEEEAIQALNHLRRVLHEVSPFAQEPVDCVLWVKADEVVANDYNPNVMAPGEKKLL
KHSLEQDGFTQPVVVSEEKEHYLVVDGFHRQLLGREAGTGERLKGWLPVTCINPERKGQASRIAATIRHNRARGKHQITS
MSDIVRDLSRLGWMDERIGTELGMDQDEVLRLKQISGLTELFQEEDFSPAWTVR

Sequences:

>Translated_214_residues
MGDSVTPEVEVLSDMIRQYFSQERPEEEAIQALNHLRRVLHEVSPFAQEPVDCVLWVKADEVVANDYNPNVMAPGEKKLL
KHSLEQDGFTQPVVVSEEKEHYLVVDGFHRQLLGREAGTGERLKGWLPVTCINPERKGQASRIAATIRHNRARGKHQITS
MSDIVRDLSRLGWMDERIGTELGMDQDEVLRLKQISGLTELFQEEDFSPAWTVR
>Mature_213_residues
GDSVTPEVEVLSDMIRQYFSQERPEEEAIQALNHLRRVLHEVSPFAQEPVDCVLWVKADEVVANDYNPNVMAPGEKKLLK
HSLEQDGFTQPVVVSEEKEHYLVVDGFHRQLLGREAGTGERLKGWLPVTCINPERKGQASRIAATIRHNRARGKHQITSM
SDIVRDLSRLGWMDERIGTELGMDQDEVLRLKQISGLTELFQEEDFSPAWTVR

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786817, Length=216, Percent_Identity=55.5555555555556, Blast_Score=241, Evalue=2e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 24428; Mature: 24297

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDSVTPEVEVLSDMIRQYFSQERPEEEAIQALNHLRRVLHEVSPFAQEPVDCVLWVKAD
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHCCCCEEEEEEECC
EVVANDYNPNVMAPGEKKLLKHSLEQDGFTQPVVVSEEKEHYLVVDGFHRQLLGREAGTG
HHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECHHHHHHCCCCCCC
ERLKGWLPVTCINPERKGQASRIAATIRHNRARGKHQITSMSDIVRDLSRLGWMDERIGT
CHHCCCEEEEEECCHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHH
ELGMDQDEVLRLKQISGLTELFQEEDFSPAWTVR
HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GDSVTPEVEVLSDMIRQYFSQERPEEEAIQALNHLRRVLHEVSPFAQEPVDCVLWVKAD
CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHCCCCEEEEEEECC
EVVANDYNPNVMAPGEKKLLKHSLEQDGFTQPVVVSEEKEHYLVVDGFHRQLLGREAGTG
HHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECHHHHHHCCCCCCC
ERLKGWLPVTCINPERKGQASRIAATIRHNRARGKHQITSMSDIVRDLSRLGWMDERIGT
CHHCCCEEEEEECCHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHH
ELGMDQDEVLRLKQISGLTELFQEEDFSPAWTVR
HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]