| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is 218696603
Identifier: 218696603
GI number: 218696603
Start: 3389876
End: 3390076
Strand: Direct
Name: 218696603
Synonym: EC55989_3302
Alternate gene names: NA
Gene position: 3389876-3390076 (Clockwise)
Preceding gene: 218696602
Following gene: 218696604
Centisome position: 65.76
GC content: 46.27
Gene sequence:
>201_bases GTGGATATTCATCTCAACCTGAAAATCGGTGCTGACTGGCAGTTACGCGGGCAGCAAAAGCGCGTTGTCACACCGGGCCA GAATGAAAAGTATTATCTTGCCGGTGCACTGCACATCGGTACGGGTAAAGTCAGCTACATTGGTGGAAACAGTAAAGGTT CATCCTTATTTATCAGACTGTTAAAACATCTGAAGGCGTAA
Upstream 100 bases:
>100_bases CACCGCGTATCCGTGCCCCCCACAAAGAAGAAAAAATGGCCGCTATTCATGAAACGCTGGCGAAATGCAGTGCGGAAAAC CCCGTGTTTTACGAAGATGA
Downstream 100 bases:
>100_bases AGACGATTACGCTCATTGTCGATAACTACATCATCCACAAAAGCCGTGAAACGTTGCGCTGGCTGAAAGCAAACACGAAG TTCAGGGTGATTTATCAACC
Product: putative transposase (fragment), IS630 family
Products: NA
Alternate protein names: ISO-IS200 39 kDa protein [H]
Number of amino acids: Translated: 66; Mature: 66
Protein sequence:
>66_residues MDIHLNLKIGADWQLRGQQKRVVTPGQNEKYYLAGALHIGTGKVSYIGGNSKGSSLFIRLLKHLKA
Sequences:
>Translated_66_residues MDIHLNLKIGADWQLRGQQKRVVTPGQNEKYYLAGALHIGTGKVSYIGGNSKGSSLFIRLLKHLKA >Mature_66_residues MDIHLNLKIGADWQLRGQQKRVVTPGQNEKYYLAGALHIGTGKVSYIGGNSKGSSLFIRLLKHLKA
Specific function: Unknown
COG id: COG3335
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 - InterPro: IPR001584 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 7291; Mature: 7291
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIHLNLKIGADWQLRGQQKRVVTPGQNEKYYLAGALHIGTGKVSYIGGNSKGSSLFIRL CEEEEEEEECCCEEECCCCCEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHH LKHLKA HHHHCC >Mature Secondary Structure MDIHLNLKIGADWQLRGQQKRVVTPGQNEKYYLAGALHIGTGKVSYIGGNSKGSSLFIRL CEEEEEEEECCCEEECCCCCEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHH LKHLKA HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2824781 [H]