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The map label for this gene is clpV1 [H]

Identifier: 218696585

GI number: 218696585

Start: 3369231

End: 3371780

Strand: Reverse

Name: clpV1 [H]

Synonym: EC55989_3283

Alternate gene names: 218696585

Gene position: 3371780-3369231 (Counterclockwise)

Preceding gene: 218696586

Following gene: 218696584

Centisome position: 65.41

GC content: 41.41

Gene sequence:

>2550_bases
GTGAGTATCTATCTGAAACCAATTATTAATAAATTAACTCCAGAAAGTCGAAATACTCTGGATTCTGCAATTAATTACGC
AATATCAAGGTCACATCATGAAGTAGACTGTCTACATCTTCTATGGAAGTTATTGCAGGAACATAAATATATAGCCGAAG
TGCTTTATGAGCAGTCCTTATTTAATCCTGAGTGGGTTCTTAATGCTATTGAAAGTGAACTTATCCGTATCAATACAGTA
CCACAATCCTCACCTGTATTTTCTGAGTCGATGCAGACTCTACTGGAGAAAACATGGATACATGCCAGTACTAAATGGCA
AATCGATCATATAGATATCCCTGTCTTTTTGAGTACTATGATTAATTTCAGAGATTCAATATTTCCTCTCAATGTTTCTG
ATGCGTTATGTTGTGATATGGATGTAGCTGAGGAGTTACTTATCTCTTTTTCAGACGAAGCAGAGCATTCTGCTTCTCAT
CGTCCCACCGATAGGTCTTCACATGAATATCTCAGTAAATATACTGAGAATCTCTCTCTGCGGGCAGAAACAGGTAAATT
AGATCCGGTTACTGGCAGAGAGAAGGAAGTCAGACAACTTATCGATATTTTGCTTCGTCGCAGACAGAATAATCCAATAC
TGACCGGTGAACCGGGAGTAGGGAAAAGTAGTATAGTAGAAGGTTTAGCACTGCAAATTGCGTCTGGCCGTGTGCCTGAT
GTACTGAAGAATGTCCGGATCCATGCCCTTGATATGGGGGCTCTGCTTGCGGGAGCCAGTGTCAGAGGGGAATTCGAAAA
TCGCCTAAAATCACTGTTGACCGAACTTAATTCTTTGGATGGCACAGCTATTTTGTTTATTGATGAGGCTCATTCCCTTA
TCGGTGCAGGAGGACTTCCGGGACAGACTGATGCAGCTAATTTGCTTAAGCCTGCTCTTGCCCGTGGAGAATTGCGCATT
ATAGCCGCAACGACATGGGGAGAATATAAAAAGTATTTTGAAAAGGATGGGGCGTTAGCCCGGCGTTTTCAGATAGTAAA
AGTAGCAGAGCCAAATCAGGATGTCACAGCGGAAATGCTACGTTCTCTTTTGCCCATGATGGAAAAACACCATAATGTTT
CTATCAGGGAAGAAGCAATAACTGCAACGGTACATCTATCAGACCGTTATCTGCATGGGCGCCGTCAACCAGATAAATCT
GTAAGTCTGTTAGATACAGCTTGTTCTCGGGTTGCTGTATCTCAGTCTACATCACCAGATGCCATTCAGGATGTCGAAGC
TTCATTGGTAAGATACCAAGGGGAACTTGCGCTGCTGACACAGGAAAGGTCAGATGTTTTGCGTCAGGAAATGCTTGCAA
ATAAAATTGCTCAACTTGAGGAGGAGCTTGAGCAACTCAAATCAGCGTGGCGTCATCAAAGTGAACTGGTTGCAAAAATA
CAAAGTTCAGATGATATTTCATCAAAGAATATGTACAGAAAAGAACTGGAAAGTGCATATAAGAAAGACAGTCCTATGGT
TTTTGAGTGTGTGGATAAAAATTGTGTTGCTGATGTTGTTTCTGGGTGGACAGGTGTTCCACTGGGTGTATGCCTTGATG
GTGAACAACAAAAAGCATCCGGTCTGTTAAGATGCTTGGAGCAGCGAGTTTTGGGGCAGCGATATGCTATGTCCGCTATT
GCATCACAAGTTCTTATTTGTCGGGCAGATCTTAAAGATCCTGTAAAACCTGATGGGGTATTTTTACTTGCGGGCCCTTC
TGGCACAGGCAAAACGGAGACAGCCAGGGCGCTGGCCGAGTTTGTTTATGGGGATGAGAATAAACTCATCACGATTAATA
TGACTGAATTTCAGGAAGCTCACACTGTTTCCACTCTGAAGGGGGCACCTCCTGGATATGTTGGTTTTGGTCAGGGAGGG
ACTCTTACTGAAAGGGTGAGTCATAATCCATACAGTGTTATTCTGCTTGATGAAATTGAAAAAGCACATCCGGATGTCCT
GGAGTTCTTCTTCCAGATATTTGACTCAGGTATTATCGAGGATGCTGAAGGTAAGATGGTGTCTTTCAGAGATTGTCTCA
TAATAATGACATCAAACTTTGCCAGTGAAAATATCACAAACATATGGAATGATGGTGAGACAAATAGAGACAGAATAAAA
GAAATGCTTCTTCCTTTGTTTAATGAGCATTTTGGGGCGGCATTTATGGGGAGAACTAACTTAATTCCGTTCACACCGTT
GCATTCCAAAACACTGAGAGATATCGTACTCATTAAAATTGATAAGATCTGCCAACGTTTTGAACAGGCATCAGGTCAGA
TGTATAAGATAGAATACAATGATTCTCTTATTGACTGGATTACACATCATTGTCAATGTGATAAGTCTGGAGCTAGGGAT
ATAGACTCAGTACTTAACAGCACGGTTCTTCCTGTCTTGGCCAGATATTTGACTGACTCTGAAGATAATAGAACCCCCAA
GAAAATAAGAATATCAGTAAGGAAAAATAACATTACATTACGTAGTTCGCAATTTGCAACTCGTAATTGA

Upstream 100 bases:

>100_bases
GAGTAATAAGCTGCTTACCACACATAGCTGGGAGAAAAGTGCCTGGATTTCCAGACTGCCCGGCAATATAACAATATGTC
CAGTAGTACAGGAGTGATAA

Downstream 100 bases:

>100_bases
CTATCTTTGATTTGTCCTGTACCTAGACCAAAGTGAGGCAGAATATCTGGTTCTCATGTGCTAGGTATGACGCGTTGTAT
CGTGGTTGGCACAGTTATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 849; Mature: 848

Protein sequence:

>849_residues
MSIYLKPIINKLTPESRNTLDSAINYAISRSHHEVDCLHLLWKLLQEHKYIAEVLYEQSLFNPEWVLNAIESELIRINTV
PQSSPVFSESMQTLLEKTWIHASTKWQIDHIDIPVFLSTMINFRDSIFPLNVSDALCCDMDVAEELLISFSDEAEHSASH
RPTDRSSHEYLSKYTENLSLRAETGKLDPVTGREKEVRQLIDILLRRRQNNPILTGEPGVGKSSIVEGLALQIASGRVPD
VLKNVRIHALDMGALLAGASVRGEFENRLKSLLTELNSLDGTAILFIDEAHSLIGAGGLPGQTDAANLLKPALARGELRI
IAATTWGEYKKYFEKDGALARRFQIVKVAEPNQDVTAEMLRSLLPMMEKHHNVSIREEAITATVHLSDRYLHGRRQPDKS
VSLLDTACSRVAVSQSTSPDAIQDVEASLVRYQGELALLTQERSDVLRQEMLANKIAQLEEELEQLKSAWRHQSELVAKI
QSSDDISSKNMYRKELESAYKKDSPMVFECVDKNCVADVVSGWTGVPLGVCLDGEQQKASGLLRCLEQRVLGQRYAMSAI
ASQVLICRADLKDPVKPDGVFLLAGPSGTGKTETARALAEFVYGDENKLITINMTEFQEAHTVSTLKGAPPGYVGFGQGG
TLTERVSHNPYSVILLDEIEKAHPDVLEFFFQIFDSGIIEDAEGKMVSFRDCLIIMTSNFASENITNIWNDGETNRDRIK
EMLLPLFNEHFGAAFMGRTNLIPFTPLHSKTLRDIVLIKIDKICQRFEQASGQMYKIEYNDSLIDWITHHCQCDKSGARD
IDSVLNSTVLPVLARYLTDSEDNRTPKKIRISVRKNNITLRSSQFATRN

Sequences:

>Translated_849_residues
MSIYLKPIINKLTPESRNTLDSAINYAISRSHHEVDCLHLLWKLLQEHKYIAEVLYEQSLFNPEWVLNAIESELIRINTV
PQSSPVFSESMQTLLEKTWIHASTKWQIDHIDIPVFLSTMINFRDSIFPLNVSDALCCDMDVAEELLISFSDEAEHSASH
RPTDRSSHEYLSKYTENLSLRAETGKLDPVTGREKEVRQLIDILLRRRQNNPILTGEPGVGKSSIVEGLALQIASGRVPD
VLKNVRIHALDMGALLAGASVRGEFENRLKSLLTELNSLDGTAILFIDEAHSLIGAGGLPGQTDAANLLKPALARGELRI
IAATTWGEYKKYFEKDGALARRFQIVKVAEPNQDVTAEMLRSLLPMMEKHHNVSIREEAITATVHLSDRYLHGRRQPDKS
VSLLDTACSRVAVSQSTSPDAIQDVEASLVRYQGELALLTQERSDVLRQEMLANKIAQLEEELEQLKSAWRHQSELVAKI
QSSDDISSKNMYRKELESAYKKDSPMVFECVDKNCVADVVSGWTGVPLGVCLDGEQQKASGLLRCLEQRVLGQRYAMSAI
ASQVLICRADLKDPVKPDGVFLLAGPSGTGKTETARALAEFVYGDENKLITINMTEFQEAHTVSTLKGAPPGYVGFGQGG
TLTERVSHNPYSVILLDEIEKAHPDVLEFFFQIFDSGIIEDAEGKMVSFRDCLIIMTSNFASENITNIWNDGETNRDRIK
EMLLPLFNEHFGAAFMGRTNLIPFTPLHSKTLRDIVLIKIDKICQRFEQASGQMYKIEYNDSLIDWITHHCQCDKSGARD
IDSVLNSTVLPVLARYLTDSEDNRTPKKIRISVRKNNITLRSSQFATRN
>Mature_848_residues
SIYLKPIINKLTPESRNTLDSAINYAISRSHHEVDCLHLLWKLLQEHKYIAEVLYEQSLFNPEWVLNAIESELIRINTVP
QSSPVFSESMQTLLEKTWIHASTKWQIDHIDIPVFLSTMINFRDSIFPLNVSDALCCDMDVAEELLISFSDEAEHSASHR
PTDRSSHEYLSKYTENLSLRAETGKLDPVTGREKEVRQLIDILLRRRQNNPILTGEPGVGKSSIVEGLALQIASGRVPDV
LKNVRIHALDMGALLAGASVRGEFENRLKSLLTELNSLDGTAILFIDEAHSLIGAGGLPGQTDAANLLKPALARGELRII
AATTWGEYKKYFEKDGALARRFQIVKVAEPNQDVTAEMLRSLLPMMEKHHNVSIREEAITATVHLSDRYLHGRRQPDKSV
SLLDTACSRVAVSQSTSPDAIQDVEASLVRYQGELALLTQERSDVLRQEMLANKIAQLEEELEQLKSAWRHQSELVAKIQ
SSDDISSKNMYRKELESAYKKDSPMVFECVDKNCVADVVSGWTGVPLGVCLDGEQQKASGLLRCLEQRVLGQRYAMSAIA
SQVLICRADLKDPVKPDGVFLLAGPSGTGKTETARALAEFVYGDENKLITINMTEFQEAHTVSTLKGAPPGYVGFGQGGT
LTERVSHNPYSVILLDEIEKAHPDVLEFFFQIFDSGIIEDAEGKMVSFRDCLIIMTSNFASENITNIWNDGETNRDRIKE
MLLPLFNEHFGAAFMGRTNLIPFTPLHSKTLRDIVLIKIDKICQRFEQASGQMYKIEYNDSLIDWITHHCQCDKSGARDI
DSVLNSTVLPVLARYLTDSEDNRTPKKIRISVRKNNITLRSSQFATRN

Specific function: Required for secretion of hcp1 probably by providing the energy source for its translocation [H]

COG id: COG0542

COG function: function code O; ATPases with chaperone activity, ATP-binding subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the clpA/clpB family [H]

Homologues:

Organism=Homo sapiens, GI13540606, Length=299, Percent_Identity=32.4414715719064, Blast_Score=144, Evalue=3e-34,
Organism=Escherichia coli, GI1788943, Length=703, Percent_Identity=38.8335704125178, Blast_Score=489, Evalue=1e-139,
Organism=Escherichia coli, GI1787109, Length=267, Percent_Identity=44.9438202247191, Blast_Score=241, Evalue=2e-64,
Organism=Saccharomyces cerevisiae, GI6320464, Length=714, Percent_Identity=36.4145658263305, Blast_Score=445, Evalue=1e-125,
Organism=Saccharomyces cerevisiae, GI6323002, Length=685, Percent_Identity=36.0583941605839, Blast_Score=435, Evalue=1e-122,

Paralogues:

None

Copy number: 560 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013093
- InterPro:   IPR003959
- InterPro:   IPR017729
- InterPro:   IPR018368
- InterPro:   IPR001270
- InterPro:   IPR019489
- InterPro:   IPR023150 [H]

Pfam domain/function: PF00004 AAA; PF07724 AAA_2; PF10431 ClpB_D2-small [H]

EC number: NA

Molecular weight: Translated: 95154; Mature: 95022

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: PS00870 CLPAB_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIYLKPIINKLTPESRNTLDSAINYAISRSHHEVDCLHLLWKLLQEHKYIAEVLYEQSL
CCEEHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
FNPEWVLNAIESELIRINTVPQSSPVFSESMQTLLEKTWIHASTKWQIDHIDIPVFLSTM
CCHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHH
INFRDSIFPLNVSDALCCDMDVAEELLISFSDEAEHSASHRPTDRSSHEYLSKYTENLSL
HHHCCCEEECCCCCHHHCCHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHCCEE
RAETGKLDPVTGREKEVRQLIDILLRRRQNNPILTGEPGVGKSSIVEGLALQIASGRVPD
EECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHH
VLKNVRIHALDMGALLAGASVRGEFENRLKSLLTELNSLDGTAILFIDEAHSLIGAGGLP
HHHCCEEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHCCCCCC
GQTDAANLLKPALARGELRIIAATTWGEYKKYFEKDGALARRFQIVKVAEPNQDVTAEML
CCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCHHHHEEEEEECCCCCCHHHHHH
RSLLPMMEKHHNVSIREEAITATVHLSDRYLHGRRQPDKSVSLLDTACSRVAVSQSTSPD
HHHHHHHHHCCCCCEEHHHEEEEEEECHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCH
AIQDVEASLVRYQGELALLTQERSDVLRQEMLANKIAQLEEELEQLKSAWRHQSELVAKI
HHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSSDDISSKNMYRKELESAYKKDSPMVFECVDKNCVADVVSGWTGVPLGVCLDGEQQKAS
HCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHCCHHHHHHHCCCCCCCEEEEECCCHHHHH
GLLRCLEQRVLGQRYAMSAIASQVLICRADLKDPVKPDGVFLLAGPSGTGKTETARALAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHH
FVYGDENKLITINMTEFQEAHTVSTLKGAPPGYVGFGQGGTLTERVSHNPYSVILLDEIE
HHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHCCCCEEEEEECCHH
KAHPDVLEFFFQIFDSGIIEDAEGKMVSFRDCLIIMTSNFASENITNIWNDGETNRDRIK
HCCHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEEEECCCCCCCCHHCCCCCCCCHHHHH
EMLLPLFNEHFGAAFMGRTNLIPFTPLHSKTLRDIVLIKIDKICQRFEQASGQMYKIEYN
HHHHHHHHHHHCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
DSLIDWITHHCQCDKSGARDIDSVLNSTVLPVLARYLTDSEDNRTPKKIRISVRKNNITL
CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCEEE
RSSQFATRN
ECCCCCCCC
>Mature Secondary Structure 
SIYLKPIINKLTPESRNTLDSAINYAISRSHHEVDCLHLLWKLLQEHKYIAEVLYEQSL
CEEHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
FNPEWVLNAIESELIRINTVPQSSPVFSESMQTLLEKTWIHASTKWQIDHIDIPVFLSTM
CCHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHH
INFRDSIFPLNVSDALCCDMDVAEELLISFSDEAEHSASHRPTDRSSHEYLSKYTENLSL
HHHCCCEEECCCCCHHHCCHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHCCEE
RAETGKLDPVTGREKEVRQLIDILLRRRQNNPILTGEPGVGKSSIVEGLALQIASGRVPD
EECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHH
VLKNVRIHALDMGALLAGASVRGEFENRLKSLLTELNSLDGTAILFIDEAHSLIGAGGLP
HHHCCEEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHCCCCCC
GQTDAANLLKPALARGELRIIAATTWGEYKKYFEKDGALARRFQIVKVAEPNQDVTAEML
CCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCHHHHEEEEEECCCCCCHHHHHH
RSLLPMMEKHHNVSIREEAITATVHLSDRYLHGRRQPDKSVSLLDTACSRVAVSQSTSPD
HHHHHHHHHCCCCCEEHHHEEEEEEECHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCH
AIQDVEASLVRYQGELALLTQERSDVLRQEMLANKIAQLEEELEQLKSAWRHQSELVAKI
HHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSSDDISSKNMYRKELESAYKKDSPMVFECVDKNCVADVVSGWTGVPLGVCLDGEQQKAS
HCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHCCHHHHHHHCCCCCCCEEEEECCCHHHHH
GLLRCLEQRVLGQRYAMSAIASQVLICRADLKDPVKPDGVFLLAGPSGTGKTETARALAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHH
FVYGDENKLITINMTEFQEAHTVSTLKGAPPGYVGFGQGGTLTERVSHNPYSVILLDEIE
HHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHCCCCEEEEEECCHH
KAHPDVLEFFFQIFDSGIIEDAEGKMVSFRDCLIIMTSNFASENITNIWNDGETNRDRIK
HCCHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEEEECCCCCCCCHHCCCCCCCCHHHHH
EMLLPLFNEHFGAAFMGRTNLIPFTPLHSKTLRDIVLIKIDKICQRFEQASGQMYKIEYN
HHHHHHHHHHHCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
DSLIDWITHHCQCDKSGARDIDSVLNSTVLPVLARYLTDSEDNRTPKKIRISVRKNNITL
CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCEEE
RSSQFATRN
ECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]