| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is 218696579
Identifier: 218696579
GI number: 218696579
Start: 3359214
End: 3359564
Strand: Reverse
Name: 218696579
Synonym: EC55989_3275
Alternate gene names: NA
Gene position: 3359564-3359214 (Counterclockwise)
Preceding gene: 218696580
Following gene: 218696578
Centisome position: 65.17
GC content: 52.42
Gene sequence:
>351_bases ATGATTTCACTCCCATCAGGTACCCGTATCTGGCTCGTTGCCGGCGTTACTGATATGCGTAAATCCTTCAACGGTCTGGG GGAGCAGATACAGCATGTGCTGGATGATAACCCCTTCTCCGGTCACCTGTTTATCTTCCGTGGCCGACGGGGAGACACGA TTAAAATCCTGTGGGCTGATGCTGATGGTCTGTGCCTGTTCACCAAACGCCTTGAGGAAGGTCAGTTTATCTGGCCTGCG GTGCGTGACGGTAAGATATCCATTACCCGCTCGCAACTGGCAATGCTCCTCGATAAGCTGGACTGGCGTCAGCCAAAAAC ATCCCGCCTTAACGCACTGACAATGTTGTAA
Upstream 100 bases:
>100_bases CTTCCTGCCATGTGGAATTCCATTACGGTAAAATGATGCTGGAAAATCCTTCACCAGAGCTGCTCACGGTGTTGATCCGT GAGCTGACCGGGAGGGGACG
Downstream 100 bases:
>100_bases AAAACTCCTGACCGCATTATAAAAACGGCCATGAGTCAGAAATACCTCATTCGCATCGCTGAGCTGGAAAGGCTGCTCTC TGAGCAGGCTGAAGCCCTCC
Product: conserved hypothetical protein, putative transposase ORF2, IS66 family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MISLPSGTRIWLVAGVTDMRKSFNGLGEQIQHVLDDNPFSGHLFIFRGRRGDTIKILWADADGLCLFTKRLEEGQFIWPA VRDGKISITRSQLAMLLDKLDWRQPKTSRLNALTML
Sequences:
>Translated_116_residues MISLPSGTRIWLVAGVTDMRKSFNGLGEQIQHVLDDNPFSGHLFIFRGRRGDTIKILWADADGLCLFTKRLEEGQFIWPA VRDGKISITRSQLAMLLDKLDWRQPKTSRLNALTML >Mature_116_residues MISLPSGTRIWLVAGVTDMRKSFNGLGEQIQHVLDDNPFSGHLFIFRGRRGDTIKILWADADGLCLFTKRLEEGQFIWPA VRDGKISITRSQLAMLLDKLDWRQPKTSRLNALTML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 34 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008878 [H]
Pfam domain/function: PF05717 Transposase_34 [H]
EC number: NA
Molecular weight: Translated: 13214; Mature: 13214
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISLPSGTRIWLVAGVTDMRKSFNGLGEQIQHVLDDNPFSGHLFIFRGRRGDTIKILWAD CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEC ADGLCLFTKRLEEGQFIWPAVRDGKISITRSQLAMLLDKLDWRQPKTSRLNALTML CCCEEEEEEECCCCCEEECEECCCEEEEEHHHHHHHHHHHCCCCCCCCCCEEEECC >Mature Secondary Structure MISLPSGTRIWLVAGVTDMRKSFNGLGEQIQHVLDDNPFSGHLFIFRGRRGDTIKILWAD CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEC ADGLCLFTKRLEEGQFIWPAVRDGKISITRSQLAMLLDKLDWRQPKTSRLNALTML CCCEEEEEEECCCCCEEECEECCCEEEEEHHHHHHHHHHHCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]