Definition Escherichia coli 55989, complete genome.
Accession NC_011748
Length 5,154,862

Click here to switch to the map view.

The map label for this gene is yqeJ

Identifier: 218696444

GI number: 218696444

Start: 3206456

End: 3206938

Strand: Direct

Name: yqeJ

Synonym: EC55989_3125

Alternate gene names: 218696444

Gene position: 3206456-3206938 (Clockwise)

Preceding gene: 218696443

Following gene: 218696446

Centisome position: 62.2

GC content: 31.47

Gene sequence:

>483_bases
GTGATTGATTATAAAAAAAACTTATTATTTATTTTAGTTTTTATCAGTGGATTTATTCTCTTCACTGTCTATTCTTACAC
TGCAGAAAAAATGATATATAACGAAACATGCACTGCAAATTGGGTAATTTTTAATGACCAGGGACGAGCAAATCTTACCA
TCGACTTTATGTATAACAAAAAAAATAAAACAGGAACTGTTGCGTTGAGTGGAACCTGGCAACAAGGTAACAGAGAAAGT
AAATCAATACGGCGAAATATTGAATACACATGGATTGAAAACTATGACACAGCCCATTTAACATCAAAGAAAGTTAATAA
GTTTGAGATTATGGATCAAGTTGATGATGATAGACTTGCACAACTTATTCCTGATTTTTATGTCTTTCCAGAAAAAAGTG
TAAGCTATAATATACTAAAGCAAGGTAAGCATGCTTTTATTTTGAGCATTGGTAACAGAGCAATAATGCATTGTGCAAGG
TAA

Upstream 100 bases:

>100_bases
GCAAAATCCTCACCGGGGATGATTGTTATGGCATGCAATAAAAACTATAACCAACATGAAGTGGCAGACTGTTTAACCCT
GTCTTACCGTGAGGTTAATC

Downstream 100 bases:

>100_bases
ACTAAAATAGATAACAAAAAGATGGAACCTCGTTAATCATAAAACAATAAAATTAAATATTCTCGCAGTATATGGCAGTC
TAAAGCATCAAAGTTTTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MIDYKKNLLFILVFISGFILFTVYSYTAEKMIYNETCTANWVIFNDQGRANLTIDFMYNKKNKTGTVALSGTWQQGNRES
KSIRRNIEYTWIENYDTAHLTSKKVNKFEIMDQVDDDRLAQLIPDFYVFPEKSVSYNILKQGKHAFILSIGNRAIMHCAR

Sequences:

>Translated_160_residues
MIDYKKNLLFILVFISGFILFTVYSYTAEKMIYNETCTANWVIFNDQGRANLTIDFMYNKKNKTGTVALSGTWQQGNRES
KSIRRNIEYTWIENYDTAHLTSKKVNKFEIMDQVDDDRLAQLIPDFYVFPEKSVSYNILKQGKHAFILSIGNRAIMHCAR
>Mature_160_residues
MIDYKKNLLFILVFISGFILFTVYSYTAEKMIYNETCTANWVIFNDQGRANLTIDFMYNKKNKTGTVALSGTWQQGNRES
KSIRRNIEYTWIENYDTAHLTSKKVNKFEIMDQVDDDRLAQLIPDFYVFPEKSVSYNILKQGKHAFILSIGNRAIMHCAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082167, Length=160, Percent_Identity=100, Blast_Score=335, Evalue=1e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQEJ_ECOLI (Q46943)

Other databases:

- EMBL:   U29581
- EMBL:   U00096
- EMBL:   AP009048
- EMBL:   U83187
- PIR:   A65068
- RefSeq:   AP_003411.1
- RefSeq:   NP_417325.4
- STRING:   Q46943
- EnsemblBacteria:   EBESCT00000002679
- EnsemblBacteria:   EBESCT00000017806
- GeneID:   947328
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW5455
- KEGG:   eco:b2848
- EchoBASE:   EB2904
- EcoGene:   EG13101
- eggNOG:   NOG14307
- GeneTree:   EBGT00050000009246
- HOGENOM:   HBG467237
- OMA:   EYTWVEN
- ProtClustDB:   CLSK879934
- BioCyc:   EcoCyc:G7468-MONOMER
- Genevestigator:   Q46943

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18720; Mature: 18720

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1c204f20)-;

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDYKKNLLFILVFISGFILFTVYSYTAEKMIYNETCTANWVIFNDQGRANLTIDFMYNK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCEEEEEEEEEEC
KNKTGTVALSGTWQQGNRESKSIRRNIEYTWIENYDTAHLTSKKVNKFEIMDQVDDDRLA
CCCCEEEEEEECCCCCCCHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEECCCCCCHHHH
QLIPDFYVFPEKSVSYNILKQGKHAFILSIGNRAIMHCAR
HHCCCCEECCCCCCEEHHHHCCCEEEEEEECCCEEEEECH
>Mature Secondary Structure
MIDYKKNLLFILVFISGFILFTVYSYTAEKMIYNETCTANWVIFNDQGRANLTIDFMYNK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCEEEEEEEEEEC
KNKTGTVALSGTWQQGNRESKSIRRNIEYTWIENYDTAHLTSKKVNKFEIMDQVDDDRLA
CCCCEEEEEEECCCCCCCHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEECCCCCCHHHH
QLIPDFYVFPEKSVSYNILKQGKHAFILSIGNRAIMHCAR
HHCCCCEECCCCCCEEHHHHCCCEEEEEEECCCEEEEECH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503