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The map label for this gene is yqeH

Identifier: 218696442

GI number: 218696442

Start: 3204688

End: 3205320

Strand: Direct

Name: yqeH

Synonym: EC55989_3123

Alternate gene names: 218696442

Gene position: 3204688-3205320 (Clockwise)

Preceding gene: 218696441

Following gene: 218696443

Centisome position: 62.17

GC content: 37.6

Gene sequence:

>633_bases
ATGGGGCTTTGTAGTCGTTATAAAAGTCTTACATGCAATAGTTGCTCAATGCATTGCCAAATAATGCCAGAAGAGTCACC
GCGTTTGCAGTACTGCGCAAACTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAG
GTATCTTAACAAAAAACCACAATGCGAGATTAAGCGGATATATTTTTGTCGATTTTTCAGTAAGTTTTTTACGTCTATTC
CTTGAAAAGGACTGGATTGACTATCTTGCAAGTACTGACATGGGGATTGTTTTAGTCAGCGACCGCAATATGCAATCGCT
AGCTAATTACTGGCGAAAACACAACTCAGCAATATCTGCTGTCATATATAATGATGATGGTCTTGATGTTGCCAATGAAA
AGATCAGACAACTATTTATTGGTCGTTATTTATCATTTACCAGAGGTAACACATTAACTCAGATGGAATTCACCATAATG
GGGTATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAA
GCAACGAATCGAAAAGAGAATGGGTGATAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGA

Upstream 100 bases:

>100_bases
ATCGCAATTTTTCCCAGCAAAATTACAAAATCATGGTGTATTGACATCATCAATCACCAATGAAATTATGCAATTATATA
CGGATAGGGAGGTTCTTAAC

Downstream 100 bases:

>100_bases
TACTCAACGACCAGGCAGAATCATACTCTGTTTATACGGGCATTTATTGAAATGTCCGTATTTTATAAATAGGCCGTCCC
CTCAAGAGTAAACACCATAG

Product: conserved hypothetical protein; putative bipartite regulator domain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MGLCSRYKSLTCNSCSMHCQIMPEESPRLQYCANSCFCMWPEESSYFNRGVVEGILTKNHNARLSGYIFVDFSVSFLRLF
LEKDWIDYLASTDMGIVLVSDRNMQSLANYWRKHNSAISAVIYNDDGLDVANEKIRQLFIGRYLSFTRGNTLTQMEFTIM
GYMVSGYNPYQIAEVLDMDIRSIYAYKQRIEKRMGDKINELFIRSHSVQH

Sequences:

>Translated_210_residues
MGLCSRYKSLTCNSCSMHCQIMPEESPRLQYCANSCFCMWPEESSYFNRGVVEGILTKNHNARLSGYIFVDFSVSFLRLF
LEKDWIDYLASTDMGIVLVSDRNMQSLANYWRKHNSAISAVIYNDDGLDVANEKIRQLFIGRYLSFTRGNTLTQMEFTIM
GYMVSGYNPYQIAEVLDMDIRSIYAYKQRIEKRMGDKINELFIRSHSVQH
>Mature_209_residues
GLCSRYKSLTCNSCSMHCQIMPEESPRLQYCANSCFCMWPEESSYFNRGVVEGILTKNHNARLSGYIFVDFSVSFLRLFL
EKDWIDYLASTDMGIVLVSDRNMQSLANYWRKHNSAISAVIYNDDGLDVANEKIRQLFIGRYLSFTRGNTLTQMEFTIMG
YMVSGYNPYQIAEVLDMDIRSIYAYKQRIEKRMGDKINELFIRSHSVQH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ykgK [H]

Homologues:

Organism=Escherichia coli, GI87082166, Length=210, Percent_Identity=99.0476190476191, Blast_Score=436, Evalue=1e-124,
Organism=Escherichia coli, GI2367106, Length=172, Percent_Identity=26.1627906976744, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 24444; Mature: 24313

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLCSRYKSLTCNSCSMHCQIMPEESPRLQYCANSCFCMWPEESSYFNRGVVEGILTKNH
CCHHHHHHCCCCCCCCEEEEECCCCCCHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCC
NARLSGYIFVDFSVSFLRLFLEKDWIDYLASTDMGIVLVSDRNMQSLANYWRKHNSAISA
CCEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCEEEE
VIYNDDGLDVANEKIRQLFIGRYLSFTRGNTLTQMEFTIMGYMVSGYNPYQIAEVLDMDI
EEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHEEEEEEECCCCHHHHHHHHHHHH
RSIYAYKQRIEKRMGDKINELFIRSHSVQH
HHHHHHHHHHHHHHCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
GLCSRYKSLTCNSCSMHCQIMPEESPRLQYCANSCFCMWPEESSYFNRGVVEGILTKNH
CHHHHHHCCCCCCCCEEEEECCCCCCHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCC
NARLSGYIFVDFSVSFLRLFLEKDWIDYLASTDMGIVLVSDRNMQSLANYWRKHNSAISA
CCEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCEEEE
VIYNDDGLDVANEKIRQLFIGRYLSFTRGNTLTQMEFTIMGYMVSGYNPYQIAEVLDMDI
EEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHEEEEEEECCCCHHHHHHHHHHHH
RSIYAYKQRIEKRMGDKINELFIRSHSVQH
HHHHHHHHHHHHHHCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]