| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is queF
Identifier: 218696393
GI number: 218696393
Start: 3142661
End: 3143509
Strand: Direct
Name: queF
Synonym: EC55989_3073
Alternate gene names: 218696393
Gene position: 3142661-3143509 (Clockwise)
Preceding gene: 218696386
Following gene: 218696394
Centisome position: 60.96
GC content: 49.35
Gene sequence:
>849_bases ATGTCTTCTTATGCAAACCATCAGGCACTTGCGGGCCTGACTCTTGGAAAATCAACCGATTACCGGGATACCTATGACGC CAGCCTACTGCAAGGCGTTCCACGCAGCCTGAATCGCGACCCGCTGGGTCTGAAAGCGGATAACCTGCCTTTTCACGGTA CGGATATCTGGACGCTGTATGAACTTTCCTGGCTGAATGCGAAAGGTTTGCCGCAGGTCGCTGTCGGTCATGTTGAACTT GATTACACCAGCGTAAATCTGATTGAGTCGAAGAGTTTTAAGCTCTATCTCAACAGTTTTAACCAGACGCGTTTTAATAA CTGGGATGAGGTGCGCCAGACGCTGGAGCGCGACTTAAGCACTTGCGCCCAGGGTAAGGTTAGCGTGGCGTTATATCGTC TTGATGAACTGGAAGGCCAGCCGATAGGTCATTTCAATGGCACCTGCATTGATGACCAGGATATCACTATCGATAACTAT GAATTCACTACTGACTATCTGGAGAATGCCACCAGCGGTGAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAA ATCAAACTGCCTGATCACCCATCAACCAGATTGGGGTTCGATCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAA AACTGCTGCGTTACCTGGTCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTG TTACGCTTCTGCCAGCCAGAGAAATTAAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCG CAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAA
Upstream 100 bases:
>100_bases ATCTTTCAGGGCTTGTGCGGTCAAATCGTCCACTAATTTCTCTCTTCACTTAAACCAGATACACTTGTCGTTTAGTTTAT CTGGTTTATGACGGTGAAAC
Downstream 100 bases:
>100_bases ATTTTTTCTCAATTTTGCGTGCTGGATTCACGCAGAAGGTTGTGAAAGGTCATCAGGCAGGGCTATTGTAATCAAAGGGA ATGACGATATTCGTCCCATA
Product: 7-cyano-7-deazaguanine reductase
Products: NA
Alternate protein names: 7-cyano-7-carbaguanine reductase; NADPH-dependent nitrile oxidoreductase; PreQ(0) reductase [H]
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MSSYANHQALAGLTLGKSTDYRDTYDASLLQGVPRSLNRDPLGLKADNLPFHGTDIWTLYELSWLNAKGLPQVAVGHVEL DYTSVNLIESKSFKLYLNSFNQTRFNNWDEVRQTLERDLSTCAQGKVSVALYRLDELEGQPIGHFNGTCIDDQDITIDNY EFTTDYLENATSGEKVVEETLVSHLLKSNCLITHQPDWGSIQIQYRGRQIDREKLLRYLVSFRHHNEFHEQCVERIFNDL LRFCQPEKLSVYARYTRRGGLDINPWRSNSDFVPSTTRLVRQ
Sequences:
>Translated_282_residues MSSYANHQALAGLTLGKSTDYRDTYDASLLQGVPRSLNRDPLGLKADNLPFHGTDIWTLYELSWLNAKGLPQVAVGHVEL DYTSVNLIESKSFKLYLNSFNQTRFNNWDEVRQTLERDLSTCAQGKVSVALYRLDELEGQPIGHFNGTCIDDQDITIDNY EFTTDYLENATSGEKVVEETLVSHLLKSNCLITHQPDWGSIQIQYRGRQIDREKLLRYLVSFRHHNEFHEQCVERIFNDL LRFCQPEKLSVYARYTRRGGLDINPWRSNSDFVPSTTRLVRQ >Mature_281_residues SSYANHQALAGLTLGKSTDYRDTYDASLLQGVPRSLNRDPLGLKADNLPFHGTDIWTLYELSWLNAKGLPQVAVGHVELD YTSVNLIESKSFKLYLNSFNQTRFNNWDEVRQTLERDLSTCAQGKVSVALYRLDELEGQPIGHFNGTCIDDQDITIDNYE FTTDYLENATSGEKVVEETLVSHLLKSNCLITHQPDWGSIQIQYRGRQIDREKLLRYLVSFRHHNEFHEQCVERIFNDLL RFCQPEKLSVYARYTRRGGLDINPWRSNSDFVPSTTRLVRQ
Specific function: Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) [H]
COG id: COG0780
COG function: function code R; Enzyme related to GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family. QueF type 2 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789158, Length=282, Percent_Identity=98.936170212766, Blast_Score=583, Evalue=1e-168,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016428 - InterPro: IPR020602 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =1.7.1.13 [H]
Molecular weight: Translated: 32558; Mature: 32427
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSYANHQALAGLTLGKSTDYRDTYDASLLQGVPRSLNRDPLGLKADNLPFHGTDIWTLY CCCCCCCHHHEEEEECCCCCCCCHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCEEEEE ELSWLNAKGLPQVAVGHVELDYTSVNLIESKSFKLYLNSFNQTRFNNWDEVRQTLERDLS EEEECCCCCCCCEEEEEEEEEEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHH TCAQGKVSVALYRLDELEGQPIGHFNGTCIDDQDITIDNYEFTTDYLENATSGEKVVEET HHHCCCEEEEEEEHHHCCCCCCCCCCCCEECCCCCEECCCCCHHHHHHCCCCHHHHHHHH LVSHLLKSNCLITHQPDWGSIQIQYRGRQIDREKLLRYLVSFRHHNEFHEQCVERIFNDL HHHHHHHCCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH LRFCQPEKLSVYARYTRRGGLDINPWRSNSDFVPSTTRLVRQ HHHCCCCHHEEEEEHHHCCCCCCCCCCCCCCCCCCHHHHHCC >Mature Secondary Structure SSYANHQALAGLTLGKSTDYRDTYDASLLQGVPRSLNRDPLGLKADNLPFHGTDIWTLY CCCCCCHHHEEEEECCCCCCCCHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCEEEEE ELSWLNAKGLPQVAVGHVELDYTSVNLIESKSFKLYLNSFNQTRFNNWDEVRQTLERDLS EEEECCCCCCCCEEEEEEEEEEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHH TCAQGKVSVALYRLDELEGQPIGHFNGTCIDDQDITIDNYEFTTDYLENATSGEKVVEET HHHCCCEEEEEEEHHHCCCCCCCCCCCCEECCCCCEECCCCCHHHHHHCCCCHHHHHHHH LVSHLLKSNCLITHQPDWGSIQIQYRGRQIDREKLLRYLVSFRHHNEFHEQCVERIFNDL HHHHHHHCCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH LRFCQPEKLSVYARYTRRGGLDINPWRSNSDFVPSTTRLVRQ HHHCCCCHHEEEEEHHHCCCCCCCCCCCCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA