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The map label for this gene is csiE

Identifier: 218696162

GI number: 218696162

Start: 2888788

End: 2890068

Strand: Direct

Name: csiE

Synonym: EC55989_2821

Alternate gene names: 218696162

Gene position: 2888788-2890068 (Clockwise)

Preceding gene: 218696161

Following gene: 218696165

Centisome position: 56.04

GC content: 51.29

Gene sequence:

>1281_bases
ATGATGCCTACGCTTGCTCCACCATCTGTCCTTTCGGCTCCCCAGCGCCGCTGCCAGATCTTGCTGACGCTCTTTCAGCC
GGGGTTGACCGCCACCACGGCAACTTTCAGCGAGCTTAATGGTGTGGATGATGATATTGCCAGTCTTGATATCAGCGAAA
CAGGACAGGAGATCCTGCGCTATCATCAACTCACACTGACGGCTGGTTATGACGGTAGCTACCGGGTTGAAGGTACAGTG
CTTAACCAACGTTTGTGTTTATTTCACTGGCTACGACGTGGTTTCCGTCTGTGTCCATCATTTATTACCAGCCATTTCAC
CCCCGCCCTGAAGAGTGAACTGAAGCGGCGCGGAATTGCGCGTAACTTTTATGACGATACCAATCTACAAGCGTTAGTGA
ATCTCTGCTCCCGACGGCTGCAAAAACGCTTTGAAACGCGCGATATTCATTTCCTGTGTCTGTATCTGCAATATTGTTTG
CTGCAACACCACGCTGGAATTACGCCTCAGTTTAATCCGCTCCAACGTCGCTGGGCGGAATCCTGCCTTGAATTTCAGGT
AGCGCAGGAAATTGGACGCCACTGGCAGCGTCGGGCGCTCCAGCCTGTACCACCTGATGAGCCACTGTTTATGGCACTAC
TTTTTTCCATGTTGCGGGTTCCCGATCCACTGCGGGATGCGCATCAGCGAGACAGACAATTGCGTCAGTCTATCAAACGT
CTGGTAAACCATTTTCGTGAGCTGGGAAATGTTCGTTTTTATGATGAACAGGGGTTATGTGATCAGCTTTATACCCACCT
CGCCCAGGCGTTAAATCGCAGTTTGTTTGCCATCGGTATTGATAATACCCTGCCGGAAGAGTTCGCCAGACTGTACCCAC
GCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGTCCATCTTTCTGATGAGGAAAGTGGT
CTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAA
TGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGG
TAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTGCGCCTTATACCATGCCATTACCGCTCTTT
TCACCACCGCTGATCTATACGGACCTGACGCTGACAACACATCAACAGGAGCAGATCCGCAAAATGCTCGAATCAGCATG
A

Upstream 100 bases:

>100_bases
GTGACGCTTGCCAACATTTCTGATGATTAGCATTCCCTTCGTCATTTCCCTGAGCAAACTTTAGCTATTCTTATCAATTA
TGCTTATGGGAGATCTACAG

Downstream 100 bases:

>100_bases
GGGAACAACTTTCGGGCGCAAAAACATTGCCGGAAGCGCCACCAGCGCCATTACCCAGAACACGCCGTGGCCCAGATATT
GATACAGGAAACCGGCGAAA

Product: stationary phase inducible protein CsiE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATTATFSELNGVDDDIASLDISETGQEILRYHQLTLTAGYDGSYRVEGTV
LNQRLCLFHWLRRGFRLCPSFITSHFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFETRDIHFLCLYLQYCL
LQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKR
LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESG
LVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLF
SPPLIYTDLTLTTHQQEQIRKMLESA

Sequences:

>Translated_426_residues
MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATTATFSELNGVDDDIASLDISETGQEILRYHQLTLTAGYDGSYRVEGTV
LNQRLCLFHWLRRGFRLCPSFITSHFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFETRDIHFLCLYLQYCL
LQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKR
LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESG
LVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLF
SPPLIYTDLTLTTHQQEQIRKMLESA
>Mature_426_residues
MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATTATFSELNGVDDDIASLDISETGQEILRYHQLTLTAGYDGSYRVEGTV
LNQRLCLFHWLRRGFRLCPSFITSHFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFETRDIHFLCLYLQYCL
LQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKR
LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESG
LVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLF
SPPLIYTDLTLTTHQQEQIRKMLESA

Specific function: Unknown

COG id: COG3711

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PRD domains [H]

Homologues:

Organism=Escherichia coli, GI87082124, Length=426, Percent_Identity=98.8262910798122, Blast_Score=866, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011608 [H]

Pfam domain/function: PF00874 PRD [H]

EC number: NA

Molecular weight: Translated: 48976; Mature: 48976

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCC
>Mature Secondary Structure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HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]