| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
Click here to switch to the map view.
The map label for this gene is yffB
Identifier: 218696097
GI number: 218696097
Start: 2814310
End: 2814666
Strand: Direct
Name: yffB
Synonym: EC55989_2751
Alternate gene names: 218696097
Gene position: 2814310-2814666 (Clockwise)
Preceding gene: 218696096
Following gene: 218696098
Centisome position: 54.6
GC content: 47.34
Gene sequence:
>357_bases ATGGTTACACTTTACGGCATCAAAAATTGTGACACCATTAAAAAGGCTCGCCGTTGGCTGGAAGCCAATAACATCGACTA TCGTTTTCATGATTACCGCGTCGATGGGCTGGACAGCGAATTATTGAACGGTTTTATCAACGAATTAGGCTGGGAAGCGT TACTGAACACCCGTGGTACAACCTGGCGTAAACTGGACGAAACCACCCGCAATAAAATCACCGATGCGGCCTCTGCGGCG GCATTAATGACTGAAATGCCTGCAATTATCAAACGTCCATTGCTCTGCGCGCCTGGTAAGCCTATGCTGCTGGGTTTCAG TGATTCCAGTTATCAGCAATTTTTCCATGAGGTGTAG
Upstream 100 bases:
>100_bases AATACTTCGATAATGTTATATTTCCTGATAATCATTTGCAGGCAAAATGTTTTCACCCTTAAATGAGTATTTATTCTCAT AGATCGAAAAAGGATTCATT
Downstream 100 bases:
>100_bases TCTATGTCGTGCCCGGTTATTGAGCTGACACAACAGCTTATTCGCCGCCCTTCCCTGAGTCCTGATGACGCAGGATGCCA GGCTTTGTTGATTGAACGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MVTLYGIKNCDTIKKARRWLEANNIDYRFHDYRVDGLDSELLNGFINELGWEALLNTRGTTWRKLDETTRNKITDAASAA ALMTEMPAIIKRPLLCAPGKPMLLGFSDSSYQQFFHEV
Sequences:
>Translated_118_residues MVTLYGIKNCDTIKKARRWLEANNIDYRFHDYRVDGLDSELLNGFINELGWEALLNTRGTTWRKLDETTRNKITDAASAA ALMTEMPAIIKRPLLCAPGKPMLLGFSDSSYQQFFHEV >Mature_118_residues MVTLYGIKNCDTIKKARRWLEANNIDYRFHDYRVDGLDSELLNGFINELGWEALLNTRGTTWRKLDETTRNKITDAASAA ALMTEMPAIIKRPLLCAPGKPMLLGFSDSSYQQFFHEV
Specific function: Unknown
COG id: COG1393
COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsC family [H]
Homologues:
Organism=Escherichia coli, GI1788815, Length=118, Percent_Identity=98.3050847457627, Blast_Score=244, Evalue=1e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006660 - InterPro: IPR012336 - InterPro: IPR012335 - InterPro: IPR006504 [H]
Pfam domain/function: PF03960 ArsC [H]
EC number: NA
Molecular weight: Translated: 13515; Mature: 13515
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTLYGIKNCDTIKKARRWLEANNIDYRFHDYRVDGLDSELLNGFINELGWEALLNTRGT CEEEECCCCCHHHHHHHHHHHCCCCCEEEECEEECCCCHHHHHHHHHHHHHHHHHHCCCC TWRKLDETTRNKITDAASAAALMTEMPAIIKRPLLCAPGKPMLLGFSDSSYQQFFHEV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHCC >Mature Secondary Structure MVTLYGIKNCDTIKKARRWLEANNIDYRFHDYRVDGLDSELLNGFINELGWEALLNTRGT CEEEECCCCCHHHHHHHHHHHCCCCCEEEECEEECCCCHHHHHHHHHHHHHHHHHHCCCC TWRKLDETTRNKITDAASAAALMTEMPAIIKRPLLCAPGKPMLLGFSDSSYQQFFHEV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1644752; 9205837; 9278503; 10493123 [H]