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The map label for this gene is yfeN

Identifier: 218696043

GI number: 218696043

Start: 2756156

End: 2756920

Strand: Direct

Name: yfeN

Synonym: EC55989_2697

Alternate gene names: 218696043

Gene position: 2756156-2756920 (Clockwise)

Preceding gene: 218696038

Following gene: 218696045

Centisome position: 53.47

GC content: 45.23

Gene sequence:

>765_bases
ATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGG
TTTTGCAGATATCGGCGTGCATTATCTGGACTGGACCAGCCGGACTACCGAAAAATCGTCGACCAAATCACACAAAGATG
ATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAGTTGGGGAGAAATGTACGGGTTCTTCGACTGGGAAAACTTC
TATAACGGTCGCCATAATAAACCAGGTAGCGAGCAGCGTTATACCTTTAAAAATACCAACCGTATTTACCTGGGTGACAC
CGGATTTAATCTCTACTTGCATGCGTATGGCACCTACGGTTCTGCGAATCGCGTGAATTTCCACGACGATATGTTCCTGT
ACGGTATCGGCTACAATTTCACCGGCAGCGGTTGGTGGTTCAAACCGTTCTTTGCTAAGCGTTATACAGATCAAACCTAT
TACACTGGCGACAACGGCTATGTCGCCGGCTGGGTTGCAGGTTACAACTTTATGCTGGGCAGCGAGAAATTCACTCTTAC
CAACTGGAACGAGTACGAGTTTGACCGTGACGCTACCTATGCAGCGGGTAATGGCGGTAAAGAAGGGCTGAATGGCGCAG
TTGCACTGTGGTGGAATGCAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGAT
TTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGA

Upstream 100 bases:

>100_bases
TATTGGCGATATTAATTCCTTTGCATTAACAATATGTCGTTTTTAGCAAACCACTTTATTAAGCAATCTACTAATAACGA
TCGGCATAGGGAATTATGCT

Downstream 100 bases:

>100_bases
TTGATTACTGCCGGGGCTCCCGGCAGTATGAATTCACTCTATATCTGATACAACGGATCCCCTTCCCGACCAGCCATTAG
CGCATTGCCCTGGTCTCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MKKHLLTLTLSSILAIPVVSHAEFKGGFADIGVHYLDWTSRTTEKSSTKSHKDDFGYLEFEGGANFSWGEMYGFFDWENF
YNGRHNKPGSEQRYTFKNTNRIYLGDTGFNLYLHAYGTYGSANRVNFHDDMFLYGIGYNFTGSGWWFKPFFAKRYTDQTY
YTGDNGYVAGWVAGYNFMLGSEKFTLTNWNEYEFDRDATYAAGNGGKEGLNGAVALWWNATSHITTGIQYRYADDKLGED
FYQDAIIYSIKFNF

Sequences:

>Translated_254_residues
MKKHLLTLTLSSILAIPVVSHAEFKGGFADIGVHYLDWTSRTTEKSSTKSHKDDFGYLEFEGGANFSWGEMYGFFDWENF
YNGRHNKPGSEQRYTFKNTNRIYLGDTGFNLYLHAYGTYGSANRVNFHDDMFLYGIGYNFTGSGWWFKPFFAKRYTDQTY
YTGDNGYVAGWVAGYNFMLGSEKFTLTNWNEYEFDRDATYAAGNGGKEGLNGAVALWWNATSHITTGIQYRYADDKLGED
FYQDAIIYSIKFNF
>Mature_254_residues
MKKHLLTLTLSSILAIPVVSHAEFKGGFADIGVHYLDWTSRTTEKSSTKSHKDDFGYLEFEGGANFSWGEMYGFFDWENF
YNGRHNKPGSEQRYTFKNTNRIYLGDTGFNLYLHAYGTYGSANRVNFHDDMFLYGIGYNFTGSGWWFKPFFAKRYTDQTY
YTGDNGYVAGWVAGYNFMLGSEKFTLTNWNEYEFDRDATYAAGNGGKEGLNGAVALWWNATSHITTGIQYRYADDKLGED
FYQDAIIYSIKFNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To V.parahaemolyticus ompK

Homologues:

Organism=Escherichia coli, GI1788747, Length=254, Percent_Identity=100, Blast_Score=517, Evalue=1e-148,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YFEN_ECOLI (P45564)

Other databases:

- EMBL:   X73828
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   G65014
- RefSeq:   AP_003001.1
- RefSeq:   NP_416903.1
- ProteinModelPortal:   P45564
- STRING:   P45564
- EnsemblBacteria:   EBESCT00000000274
- EnsemblBacteria:   EBESCT00000017598
- GeneID:   946872
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW2399
- KEGG:   eco:b2408
- EchoBASE:   EB2952
- EcoGene:   EG13160
- eggNOG:   NOG04348
- GeneTree:   EBGT00050000011755
- HOGENOM:   HBG469122
- OMA:   WGELYGF
- ProtClustDB:   PRK11528
- BioCyc:   EcoCyc:G7256-MONOMER
- Genevestigator:   P45564
- InterPro:   IPR018013

Pfam domain/function: PF03502 Channel_Tsx

EC number: NA

Molecular weight: Translated: 29233; Mature: 29233

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKHLLTLTLSSILAIPVVSHAEFKGGFADIGVHYLDWTSRTTEKSSTKSHKDDFGYLEF
CCCEEEEEEHHHHHHHHEECCCCCCCCHHHCCEEEEECCCCCCCCCCCCCCCCCCCEEEE
EGGANFSWGEMYGFFDWENFYNGRHNKPGSEQRYTFKNTNRIYLGDTGFNLYLHAYGTYG
CCCCCCCHHHEEEEECHHHHCCCCCCCCCCCCEEEEECCCEEEEECCCCEEEEEEEECCC
SANRVNFHDDMFLYGIGYNFTGSGWWFKPFFAKRYTDQTYYTGDNGYVAGWVAGYNFMLG
CCCEEEECCCEEEEEECCCCCCCCCEECCHHHHHCCCCEEEECCCCEEEEEEECEEEEEC
SEKFTLTNWNEYEFDRDATYAAGNGGKEGLNGAVALWWNATSHITTGIQYRYADDKLGED
CCEEEEECCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCEEECEEEEECCCHHCHH
FYQDAIIYSIKFNF
HHCCEEEEEEEECC
>Mature Secondary Structure
MKKHLLTLTLSSILAIPVVSHAEFKGGFADIGVHYLDWTSRTTEKSSTKSHKDDFGYLEF
CCCEEEEEEHHHHHHHHEECCCCCCCCHHHCCEEEEECCCCCCCCCCCCCCCCCCCEEEE
EGGANFSWGEMYGFFDWENFYNGRHNKPGSEQRYTFKNTNRIYLGDTGFNLYLHAYGTYG
CCCCCCCHHHEEEEECHHHHCCCCCCCCCCCCEEEEECCCEEEEECCCCEEEEEEEECCC
SANRVNFHDDMFLYGIGYNFTGSGWWFKPFFAKRYTDQTYYTGDNGYVAGWVAGYNFMLG
CCCEEEECCCEEEEEECCCCCCCCCEECCHHHHHCCCCEEEECCCCEEEEEEECEEEEEC
SEKFTLTNWNEYEFDRDATYAAGNGGKEGLNGAVALWWNATSHITTGIQYRYADDKLGED
CCEEEEECCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCEEECEEEEECCCHHCHH
FYQDAIIYSIKFNF
HHCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7559336; 9205837; 9278503