| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is yeiA
Identifier: 218695758
GI number: 218695758
Start: 2450920
End: 2452125
Strand: Direct
Name: yeiA
Synonym: EC55989_2397
Alternate gene names: 218695758
Gene position: 2450920-2452125 (Clockwise)
Preceding gene: 218695757
Following gene: 218695763
Centisome position: 47.55
GC content: 51.58
Gene sequence:
>1206_bases TTGCGGCGTGAAGTTTCCCAACCCGTTCTGCCTCTCTTCTTCCCTGTAGGCAACTGCTATGAGATGTGTGCCAAAGCCTA CGACACAGGTTGGGGCGGCGTGGTGTTTAAAACGATCGGCTTTTTTATCGCCAACGAAGTCTCGCCGCGTTTTGATCATC TGGTGAAAGAAGATACCGGTTTTATCGGCTTCAAAAATATGGAGCAGATTGCTGAACATCCGTTGGAAGAGAATCTGGCC GCCCTGCGTCAGCTGAAGGAAGATTACCCGGACAAAGTATTGATCGCTTCGATCATGGGGGAAAATGAGCAGCAATGGGA GGAGCTGGCGCGCCTGGTGCAAGAAGCTGGCGCGGATATGATCGAGTGTAACTTCTCCTGTCCGCAAATGACTTCTCATG CGATGGGTAGCGATGTCGGGCAAAGCCCGGAGCTGGTAGAAAAATATTGTCGGGCAGTGAAACGGGGTTCCACGCTGCCA ATGCTGGCGAAGATGACGCCGAATATCGGTGATATGTGCGAAGTGGCGCTGGCGGCGAAGCGCGGCGGCGCAGATGGCAT TGCGGCGATTAACACCGTTAAATCCATCACCAATATCGATCTTAATCAGAAAATCGGTATGCCGATCGTTAACGGAAAAT CGAGTATTTCCGGATATTCCGGTAAAGCGGTAAAACCGATCGCCCTGCGCTTCATTCAGCAGATGCGCACCCATCCAGAA CTGCGCGATTTCCCAATCAGCGGTATCGGCGGCATTGAAACCTGGGAGGATGCGGCTGAGTTTTTATTGCTCGGCGCAGC AACGTTACAGGTGACCACCGGCATCATGCAGTACGGGTATCGGATAGTGGAAGATATGGCAAGCGGGTTGTCGCATTATC TCGCCGATCAGGGATTTGATTCGCTGCAGGAGATGGTAGGTCTGGCGAATAACAATATTGTCCCGGCGGAAGATTTAGAC CGCAGTTATATTGTCTATCCCCGTATCAATCTTGATAAATGTGTTGGCTGTGGACGCTGTTATATTTCCTGTTACGACGG CGGTCACCAGGCGATGGAATGGAGCGAGAAAACCCGCACACCGCATTGTAATACCGAGAAATGTGTGGGTTGTCTGCTTT GTGGTCACGTCTGCCCGGTGGGTTGTATTGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACG TTGTAA
Upstream 100 bases:
>100_bases GTGGTCTATGCCGTGAAAACCGGGAAAGAAGCCGCCGAGGCGATTCATCACTATTTAGAGGGAGCTTGCTCATGTTAACG AAAGATCTTTCGATTACTTT
Downstream 100 bases:
>100_bases AACCAGAGACGCATCCGGCATTTGGCACCGATTGCCGGATGCAGCGCATCCGGCAATATCCACAATCACATCACTTCTTA CGCGCGTATTTCAGTGAATC
Product: dihydropyrimidine dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MRREVSQPVLPLFFPVGNCYEMCAKAYDTGWGGVVFKTIGFFIANEVSPRFDHLVKEDTGFIGFKNMEQIAEHPLEENLA ALRQLKEDYPDKVLIASIMGENEQQWEELARLVQEAGADMIECNFSCPQMTSHAMGSDVGQSPELVEKYCRAVKRGSTLP MLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIALRFIQQMRTHPE LRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHYLADQGFDSLQEMVGLANNNIVPAEDLD RSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRTPHCNTEKCVGCLLCGHVCPVGCIELGEVKFKKGEKEHPVT L
Sequences:
>Translated_401_residues MRREVSQPVLPLFFPVGNCYEMCAKAYDTGWGGVVFKTIGFFIANEVSPRFDHLVKEDTGFIGFKNMEQIAEHPLEENLA ALRQLKEDYPDKVLIASIMGENEQQWEELARLVQEAGADMIECNFSCPQMTSHAMGSDVGQSPELVEKYCRAVKRGSTLP MLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIALRFIQQMRTHPE LRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHYLADQGFDSLQEMVGLANNNIVPAEDLD RSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRTPHCNTEKCVGCLLCGHVCPVGCIELGEVKFKKGEKEHPVT L >Mature_401_residues MRREVSQPVLPLFFPVGNCYEMCAKAYDTGWGGVVFKTIGFFIANEVSPRFDHLVKEDTGFIGFKNMEQIAEHPLEENLA ALRQLKEDYPDKVLIASIMGENEQQWEELARLVQEAGADMIECNFSCPQMTSHAMGSDVGQSPELVEKYCRAVKRGSTLP MLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIALRFIQQMRTHPE LRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHYLADQGFDSLQEMVGLANNNIVPAEDLD RSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRTPHCNTEKCVGCLLCGHVCPVGCIELGEVKFKKGEKEHPVT L
Specific function: Unknown
COG id: COG0167
COG function: function code F; Dihydroorotate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Homo sapiens, GI119943098, Length=301, Percent_Identity=35.8803986710963, Blast_Score=178, Evalue=7e-45, Organism=Escherichia coli, GI87082059, Length=387, Percent_Identity=99.7416020671835, Blast_Score=805, Evalue=0.0, Organism=Caenorhabditis elegans, GI71984108, Length=297, Percent_Identity=39.0572390572391, Blast_Score=189, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6322633, Length=241, Percent_Identity=27.8008298755187, Blast_Score=78, Evalue=2e-15, Organism=Drosophila melanogaster, GI24640763, Length=295, Percent_Identity=37.9661016949153, Blast_Score=181, Evalue=6e-46, Organism=Drosophila melanogaster, GI18858217, Length=295, Percent_Identity=37.9661016949153, Blast_Score=181, Evalue=6e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013785 - InterPro: IPR005720 - InterPro: IPR012135 - InterPro: IPR012285 [H]
Pfam domain/function: PF01180 DHO_dh [H]
EC number: NA
Molecular weight: Translated: 44124; Mature: 44124
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRREVSQPVLPLFFPVGNCYEMCAKAYDTGWGGVVFKTIGFFIANEVSPRFDHLVKEDTG CCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCC FIGFKNMEQIAEHPLEENLAALRQLKEDYPDKVLIASIMGENEQQWEELARLVQEAGADM CCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCEEHHHHHCCCHHHHHHHHHHHHHCCCCE IECNFSCPQMTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKMTPNIGDMCEVALAAK EEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHH RGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIALRFIQQMRTHPE CCCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCC LRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHYLADQGFD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT HHHHHHHHCCCCCCCHHHCCCCEEEEECCCHHHHCCCCCEEEEEECCCHHHHHHHHHCCC PHCNTEKCVGCLLCGHVCPVGCIELGEVKFKKGEKEHPVTL CCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MRREVSQPVLPLFFPVGNCYEMCAKAYDTGWGGVVFKTIGFFIANEVSPRFDHLVKEDTG CCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCC FIGFKNMEQIAEHPLEENLAALRQLKEDYPDKVLIASIMGENEQQWEELARLVQEAGADM CCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCEEHHHHHCCCHHHHHHHHHHHHHCCCCE IECNFSCPQMTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKMTPNIGDMCEVALAAK EEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHH RGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIALRFIQQMRTHPE CCCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCC LRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHYLADQGFD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH SLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRT HHHHHHHHCCCCCCCHHHCCCCEEEEECCCHHHHCCCCCEEEEEECCCHHHHHHHHHCCC PHCNTEKCVGCLLCGHVCPVGCIELGEVKFKKGEKEHPVTL CCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 1719366 [H]