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The map label for this gene is irp

Identifier: 218695588

GI number: 218695588

Start: 2257630

End: 2258790

Strand: Direct

Name: irp

Synonym: EC55989_2209

Alternate gene names: NA

Gene position: 2257630-2258790 (Clockwise)

Preceding gene: 218695587

Following gene: 218695589

Centisome position: 43.8

GC content: 60.03

Gene sequence:

>1161_bases
TTGTGCGCAACACATTACGCGCTGGCTTTGCGCAACCTCAACGCAACCGGAGAACACGTTATGATGCCGTCCGCCTCCCC
AAAACAACGCGTACTGATTGTGGGCGCCAAATTTGGCGAAATGTACCTGAATGCCTTTATGCAGCCCCCGGAGGGGCTGG
AACTGGTCGGCCTGCTGGCGCAGGGAAGCGCCCGTTCAAGAGAGCTGGCTCATGCGTTTGGCATTCCGCTGTATACCTCG
CCGGAACAGATAACCAGGATGCCGGATATCGCCTGTATTGTCGTGCGTTCGACCGTCGCCGGAGGAACCGGTACGCAGCT
TGCCAGACACTTTCTGACGCGCGGCGTACACGTCATTCAGGAGCATCCCCTCCACCCGGATGACATCAGTTCCTTACAAA
CGCTGGCGCAGGAACAGGGCTGCTGCTATTGGGTAAACACGTTTTATCCGCATACGCGCGCGGGACGCACATGGCTTCGC
GATGCGCAGCAGCTGCGTCGCTGTCTGGCTAAGACGCCGCAGGTGGTCCACGCCACCACCAGCCGACAGTTGCTCTACTC
CACTCTGGATTTGTTGTTGCTGGCTCTGGGCGTTGATGCCGCCGCCGTGGAGTGCGACGTGGTTGGCAGCTTTAGCGATT
TTCACTGTCTGAGACTCTTCTGGCCGGAGGGAGAAGCCTGCCTGCTGCTTCAGCGCTATCTCGATCCTGACGATCCAGAT
ATGCATAGCCTTATCATGCACCGCCTGCTGCTGGGCTGGCCGGAAGGTCATCTTTCGCTGGAGGCGAGCTACGGCCCCGT
CATCTGGTCATCCAGCCTGTTTGTCGCAGACCATCAGGAGAACGCCCACAGCCTCTACCGCAGACCGGAGATCCTGCGCG
ATCTGCCGGGTCTGACGCGCAGCGCGGCGCCCCTGAGCTGGCGCGACTGCTGCGAAACCGTCGGGCCGGAGGGCGTCAGC
TGGTTGCTACACCAGTTGCGCAGCCATCTGGCGGGCGAACATCCACCAGCGGCCTGCCAAAGCGTACATCAGATCGCGTT
ATCACGTTTATGGCAGCAGATTTTACGTAAGACCGGCAATGCGGAGATCAGACGCCTGACGCCGCCGCACCACGACCGGT
TAGCCGGTTTCTACAACGATGATGATAAGGAGGCGCTGTGA

Upstream 100 bases:

>100_bases
CAGCAGAAACCGAGTGGCAGGGCTGGATAAACAACGCCGACGACGCTGTGATTGAAGCCAGCCACTGGCAAATCATGATG
GAAGCCCCCCACGTTCAGGC

Downstream 100 bases:

>100_bases
CGCAATCTGCAATGTGCATACCGCTGTGGCCCGCCCGGAACGGCAATACTGCGCATCTGGTCATGTGCCCTTTCGCTGGC
GGCAGCAGTAGCGCGTTTCG

Product: Thiazolinyl-S-HMWP1 reductase YbtU

Products: NA

Alternate protein names: Siderophore-Like Synthase Protein; Oxidoreductase; Pyochelin Biosynthetic Protein; Reductase Component; Thiazolinyl-S-HMWP1 Reductase YbtU; Oxidoreductase Domain Protein; Oxidoreductase/Methylase; Siderophore Biosynthetic Protein; Thiazoline Reductase; Yersiniabactin Synthetase Thiazolinyl Reductase Component; Pyochelin Biosynthetic Protein PchG; Polyketide Synthase

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MCATHYALALRNLNATGEHVMMPSASPKQRVLIVGAKFGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTS
PEQITRMPDIACIVVRSTVAGGTGTQLARHFLTRGVHVIQEHPLHPDDISSLQTLAQEQGCCYWVNTFYPHTRAGRTWLR
DAQQLRRCLAKTPQVVHATTSRQLLYSTLDLLLLALGVDAAAVECDVVGSFSDFHCLRLFWPEGEACLLLQRYLDPDDPD
MHSLIMHRLLLGWPEGHLSLEASYGPVIWSSSLFVADHQENAHSLYRRPEILRDLPGLTRSAAPLSWRDCCETVGPEGVS
WLLHQLRSHLAGEHPPAACQSVHQIALSRLWQQILRKTGNAEIRRLTPPHHDRLAGFYNDDDKEAL

Sequences:

>Translated_386_residues
MCATHYALALRNLNATGEHVMMPSASPKQRVLIVGAKFGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTS
PEQITRMPDIACIVVRSTVAGGTGTQLARHFLTRGVHVIQEHPLHPDDISSLQTLAQEQGCCYWVNTFYPHTRAGRTWLR
DAQQLRRCLAKTPQVVHATTSRQLLYSTLDLLLLALGVDAAAVECDVVGSFSDFHCLRLFWPEGEACLLLQRYLDPDDPD
MHSLIMHRLLLGWPEGHLSLEASYGPVIWSSSLFVADHQENAHSLYRRPEILRDLPGLTRSAAPLSWRDCCETVGPEGVS
WLLHQLRSHLAGEHPPAACQSVHQIALSRLWQQILRKTGNAEIRRLTPPHHDRLAGFYNDDDKEAL
>Mature_386_residues
MCATHYALALRNLNATGEHVMMPSASPKQRVLIVGAKFGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTS
PEQITRMPDIACIVVRSTVAGGTGTQLARHFLTRGVHVIQEHPLHPDDISSLQTLAQEQGCCYWVNTFYPHTRAGRTWLR
DAQQLRRCLAKTPQVVHATTSRQLLYSTLDLLLLALGVDAAAVECDVVGSFSDFHCLRLFWPEGEACLLLQRYLDPDDPD
MHSLIMHRLLLGWPEGHLSLEASYGPVIWSSSLFVADHQENAHSLYRRPEILRDLPGLTRSAAPLSWRDCCETVGPEGVS
WLLHQLRSHLAGEHPPAACQSVHQIALSRLWQQILRKTGNAEIRRLTPPHHDRLAGFYNDDDKEAL

Specific function: Unknown

COG id: COG4693

COG function: function code Q; Oxidoreductase (NAD-binding), involved in siderophore biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43112; Mature: 43112

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCATHYALALRNLNATGEHVMMPSASPKQRVLIVGAKFGEMYLNAFMQPPEGLELVGLLA
CCCHHHHHHHHCCCCCCCEEECCCCCCCCEEEEEECHHHHHHHHHHCCCCCCHHHHHHHH
QGSARSRELAHAFGIPLYTSPEQITRMPDIACIVVRSTVAGGTGTQLARHFLTRGVHVIQ
CCCCHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEEHHCCCCCHHHHHHHHHHHHHHHHH
EHPLHPDDISSLQTLAQEQGCCYWVNTFYPHTRAGRTWLRDAQQLRRCLAKTPQVVHATT
HCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHH
SRQLLYSTLDLLLLALGVDAAAVECDVVGSFSDFHCLRLFWPEGEACLLLQRYLDPDDPD
HHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCEEEEEECCCCCHHHHHHHHCCCCCCC
MHSLIMHRLLLGWPEGHLSLEASYGPVIWSSSLFVADHQENAHSLYRRPEILRDLPGLTR
HHHHHHHHHHHCCCCCCEEEECCCCCEEECCCEEEEECCCHHHHHHHCHHHHHHCCCCCC
SAAPLSWRDCCETVGPEGVSWLLHQLRSHLAGEHPPAACQSVHQIALSRLWQQILRKTGN
CCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
AEIRRLTPPHHDRLAGFYNDDDKEAL
CEEEECCCCCHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MCATHYALALRNLNATGEHVMMPSASPKQRVLIVGAKFGEMYLNAFMQPPEGLELVGLLA
CCCHHHHHHHHCCCCCCCEEECCCCCCCCEEEEEECHHHHHHHHHHCCCCCCHHHHHHHH
QGSARSRELAHAFGIPLYTSPEQITRMPDIACIVVRSTVAGGTGTQLARHFLTRGVHVIQ
CCCCHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEEHHCCCCCHHHHHHHHHHHHHHHHH
EHPLHPDDISSLQTLAQEQGCCYWVNTFYPHTRAGRTWLRDAQQLRRCLAKTPQVVHATT
HCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHH
SRQLLYSTLDLLLLALGVDAAAVECDVVGSFSDFHCLRLFWPEGEACLLLQRYLDPDDPD
HHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCEEEEEECCCCCHHHHHHHHCCCCCCC
MHSLIMHRLLLGWPEGHLSLEASYGPVIWSSSLFVADHQENAHSLYRRPEILRDLPGLTR
HHHHHHHHHHHCCCCCCEEEECCCCCEEECCCEEEEECCCHHHHHHHCHHHHHHCCCCCC
SAAPLSWRDCCETVGPEGVSWLLHQLRSHLAGEHPPAACQSVHQIALSRLWQQILRKTGN
CCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
AEIRRLTPPHHDRLAGFYNDDDKEAL
CEEEECCCCCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA