Click here to switch to the map view.

The map label for this gene is yedJ

Identifier: 218695566

GI number: 218695566

Start: 2218425

End: 2219120

Strand: Reverse

Name: yedJ

Synonym: EC55989_2183

Alternate gene names: 218695566

Gene position: 2219120-2218425 (Counterclockwise)

Preceding gene: 218695567

Following gene: 218695565

Centisome position: 43.05

GC content: 54.6

Gene sequence:

>696_bases
ATGGACTTACAACACTGGCAGGCACAGTTCGAAAACTGGTTGAAAAACCATCATCAGCACCAGGACGCGGCCCATGACGT
GTGTCATTTTCGCCGCGTCTGGGCTACGGCACAGAAGCTGGCGGCAGATGACGATGTCGATATGCTGGTGATTTTAACCG
CCTGTTATTTTCACGATATTGTGAGCCTGGCGAAAAATCATCCGCAGCGGCAGCGTTCTTCAATCCTGGCGGCAGAAGAG
ACGCGTCGCCTGCTCTGTGAAGAGTTCGAGCAATTTCCGGCGGAGAAAATTGAGGCCGTTTGTCATGCCATTGCCGCTCA
CAGTTTCAGCGCGCAAATCGCCCCCTTAACAACGGAAGCTAAAATCGTCCAGGATGCGGATCGGCTGGAAGCCCTGGGGG
CGATTGGCCTGGCGCGCGTGTTTGCCGTTTCAGGGGCATTGGGCGTGGCGCTGTTTGATGCCGAAGATCCGCTCGCACAG
CATCGCCCGCTTGATGATAAACGCTACGCGCTGGATCATTTCCAGACTAAGTTGTTGAAGCTACCGCAAACCATGCAAAC
CGTAAGAGGCAAGCAGCTGGCGCAGCACAACGCGCAATTTTTAGTCGAGTTTATGGCGAAGCTCAGTGCCGAACTGGCGG
GGGAGAATGAAGGTGTCGATCACAAGGTGATAGATGTGTTTTCACCCGCGGGCTAA

Upstream 100 bases:

>100_bases
GTTAGGCAGCATTGCCTGGTACACCCGACCTCGTCCCGCACGTAGCAGACGCTATGAATAAAAACTGCTAAGGTGGCGAC
TCTTTGGCAACGGAGCGCGT

Downstream 100 bases:

>100_bases
GCGCGTGGCCCTAAATGGCTGTAATTATGTTAACCTGTCGGCCATCTCAGATGGCCGGTTAAATCTATGCAGGAAAATAT
ATCAGTAACCGATTCATACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MDLQHWQAQFENWLKNHHQHQDAAHDVCHFRRVWATAQKLAADDDVDMLVILTACYFHDIVSLAKNHPQRQRSSILAAEE
TRRLLCEEFEQFPAEKIEAVCHAIAAHSFSAQIAPLTTEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDAEDPLAQ
HRPLDDKRYALDHFQTKLLKLPQTMQTVRGKQLAQHNAQFLVEFMAKLSAELAGENEGVDHKVIDVFSPAG

Sequences:

>Translated_231_residues
MDLQHWQAQFENWLKNHHQHQDAAHDVCHFRRVWATAQKLAADDDVDMLVILTACYFHDIVSLAKNHPQRQRSSILAAEE
TRRLLCEEFEQFPAEKIEAVCHAIAAHSFSAQIAPLTTEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDAEDPLAQ
HRPLDDKRYALDHFQTKLLKLPQTMQTVRGKQLAQHNAQFLVEFMAKLSAELAGENEGVDHKVIDVFSPAG
>Mature_231_residues
MDLQHWQAQFENWLKNHHQHQDAAHDVCHFRRVWATAQKLAADDDVDMLVILTACYFHDIVSLAKNHPQRQRSSILAAEE
TRRLLCEEFEQFPAEKIEAVCHAIAAHSFSAQIAPLTTEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDAEDPLAQ
HRPLDDKRYALDHFQTKLLKLPQTMQTVRGKQLAQHNAQFLVEFMAKLSAELAGENEGVDHKVIDVFSPAG

Specific function: Unknown

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

Organism=Escherichia coli, GI1788273, Length=231, Percent_Identity=96.969696969697, Blast_Score=456, Evalue=1e-130,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25889; Mature: 25889

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLQHWQAQFENWLKNHHQHQDAAHDVCHFRRVWATAQKLAADDDVDMLVILTACYFHDI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
VSLAKNHPQRQRSSILAAEETRRLLCEEFEQFPAEKIEAVCHAIAAHSFSAQIAPLTTEA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHH
KIVQDADRLEALGAIGLARVFAVSGALGVALFDAEDPLAQHRPLDDKRYALDHFQTKLLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHCCCCCHHHHHHHHHHHHHHH
LPQTMQTVRGKQLAQHNAQFLVEFMAKLSAELAGENEGVDHKVIDVFSPAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCC
>Mature Secondary Structure
MDLQHWQAQFENWLKNHHQHQDAAHDVCHFRRVWATAQKLAADDDVDMLVILTACYFHDI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
VSLAKNHPQRQRSSILAAEETRRLLCEEFEQFPAEKIEAVCHAIAAHSFSAQIAPLTTEA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHH
KIVQDADRLEALGAIGLARVFAVSGALGVALFDAEDPLAQHRPLDDKRYALDHFQTKLLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHCCCCCHHHHHHHHHHHHHHH
LPQTMQTVRGKQLAQHNAQFLVEFMAKLSAELAGENEGVDHKVIDVFSPAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 2527357; 7567469 [H]