Definition | Escherichia coli 55989, complete genome. |
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Accession | NC_011748 |
Length | 5,154,862 |
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The map label for this gene is fII
Identifier: 218695514
GI number: 218695514
Start: 2173133
End: 2173645
Strand: Reverse
Name: fII
Synonym: EC55989_2128
Alternate gene names: NA
Gene position: 2173645-2173133 (Counterclockwise)
Preceding gene: 218695515
Following gene: 218695513
Centisome position: 42.17
GC content: 53.22
Gene sequence:
>513_bases ATGGCTGTACCAAAACATCTTCGCTTTTTTACGTTGTTTGTGGATGGTGAAAACGAAGTGGGTAAAGTGACATCCGTCAC GCCGCCCAAACTGACGCGCAAAACCGACAGCTATCGTGGTGGTGGCATGATGGGGGCGGTAAGTATTGATCTCGGTCTGG ACGACTCCGCGCTTGATGCGAGTTTTGTCATGGGGGGAGCTGTTCGTGCGCTGTTCCTTAAATATGGCGGCACGATTGAC GGCACGCTGCTGCGTTTTGCGGGTGAATACTACACCGATGCAGAAAGCGATCTGTATGAAATCGAGATGCGCGGGCGTGT GACGGAAATTGATATGGGGGAAGCCAAACAGGGCGAAGCCACATCACACACTTACGCTGTCAAAAACACCTACTACAAGC TGAGCGTTAACGATCGCCCGCTGTGGGAAATCGACCTGTTGAACCACATCTACCGGAAGGACGGCAAGGACATTGTGCCT GACCGTATCCGTTCCGCGCTTGGGCTTGGCTGA
Upstream 100 bases:
>100_bases ACAAATATACGCCTGTTCCCCCGCTGGAAGACATGGAGCTTTACCAGACGTTTACTGATGAATTCTTTGGTCCCGCATTT GCGGTGCTGGGAGGTGCCTG
Downstream 100 bases:
>100_bases TAAGTAATATGCAGGCGGCGCAGTGCGTCGCCTTTGACTGAAAAGGAGACAACTGATGAAAGACATCGATACTGAAACCC GGAATAACACCGTGGCGGAT
Product: Major tail tube protein FII
Products: NA
Alternate protein names: Tail Tube Protein; Phage-Related Tail Tube Protein; Tail Fiber Component Of Prophage; Tail Tube Protein FII; Pyocin R2_PP Tail Tube Protein GpFII; Phage-Related Tail Protein; Prophage Tail Tube Protein; Phage P2 FII-Like Protein; Bacteriophage Tail Tube Protein FII; Bacteriophage-Related Tail Tube FII Protein; Phage Tail Fiber Component; Phage Tail Tube Protein FII; Bacteriophage P2 Tail Sheath Protein GPFII; Phage Tail Protein; Contractile Tail Tube Protein; Phage Tail Tube-Like Protein; Phage Tail Tube Protein; Pyocin R2_PP Tail Tube Protein; Tail Tube Protein Prophage
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MAVPKHLRFFTLFVDGENEVGKVTSVTPPKLTRKTDSYRGGGMMGAVSIDLGLDDSALDASFVMGGAVRALFLKYGGTID GTLLRFAGEYYTDAESDLYEIEMRGRVTEIDMGEAKQGEATSHTYAVKNTYYKLSVNDRPLWEIDLLNHIYRKDGKDIVP DRIRSALGLG
Sequences:
>Translated_170_residues MAVPKHLRFFTLFVDGENEVGKVTSVTPPKLTRKTDSYRGGGMMGAVSIDLGLDDSALDASFVMGGAVRALFLKYGGTID GTLLRFAGEYYTDAESDLYEIEMRGRVTEIDMGEAKQGEATSHTYAVKNTYYKLSVNDRPLWEIDLLNHIYRKDGKDIVP DRIRSALGLG >Mature_169_residues AVPKHLRFFTLFVDGENEVGKVTSVTPPKLTRKTDSYRGGGMMGAVSIDLGLDDSALDASFVMGGAVRALFLKYGGTIDG TLLRFAGEYYTDAESDLYEIEMRGRVTEIDMGEAKQGEATSHTYAVKNTYYKLSVNDRPLWEIDLLNHIYRKDGKDIVPD RIRSALGLG
Specific function: Unknown
COG id: COG3498
COG function: function code R; Phage tail tube protein FII
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18795; Mature: 18663
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVPKHLRFFTLFVDGENEVGKVTSVTPPKLTRKTDSYRGGGMMGAVSIDLGLDDSALDA CCCCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCH SFVMGGAVRALFLKYGGTIDGTLLRFAGEYYTDAESDLYEIEMRGRVTEIDMGEAKQGEA HHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCC TSHTYAVKNTYYKLSVNDRPLWEIDLLNHIYRKDGKDIVPDRIRSALGLG CCEEEEEECEEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCC >Mature Secondary Structure AVPKHLRFFTLFVDGENEVGKVTSVTPPKLTRKTDSYRGGGMMGAVSIDLGLDDSALDA CCCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCH SFVMGGAVRALFLKYGGTIDGTLLRFAGEYYTDAESDLYEIEMRGRVTEIDMGEAKQGEA HHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCC TSHTYAVKNTYYKLSVNDRPLWEIDLLNHIYRKDGKDIVPDRIRSALGLG CCEEEEEECEEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA