Definition | Escherichia coli 55989, complete genome. |
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Accession | NC_011748 |
Length | 5,154,862 |
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The map label for this gene is 218695510
Identifier: 218695510
GI number: 218695510
Start: 2169244
End: 2169738
Strand: Reverse
Name: 218695510
Synonym: EC55989_2124
Alternate gene names: NA
Gene position: 2169738-2169244 (Counterclockwise)
Preceding gene: 218695511
Following gene: 218695509
Centisome position: 42.09
GC content: 49.29
Gene sequence:
>495_bases ATGGTCATGATGATGATCTACGGCATGTTTGTTTTTGAGCTGCGCACATTGCCGCATCAGCAGTTACAGCAAAACAAAAG CTGGCGGCATGTGAAAAATGAACGCGTTAACCGTTCAGCAAGCTGGCAGTATATCGGTGCAGGTGATGATCGCATTGTGC TTTCCGGCGTGCTTTATCCTGAAATTACAGGTGGCGAAGTGTCGCTTTCATTGCTGACCACGCAGGCATATACAGGACGG CCCTGGCCTCTGATTGATGGTGTCGGGCAGATTTACGGCATGTATGTACTGACTGAAACGAATACGACCCGTTCCGAGTT TGATCGCTACGGTAAGGCGAAAAAGATAGAATTTTCACTGACTCTTGAACGCTGTGATGAGGATTTGCGGGAGCGCCTGC AATCCTCATCGTTCAGCGATATGTTGTCCGGCTTCAAAGATAAGGTGACATCATCCCTTAATAGCGCGGCCAGCTCAGTT AAGGGGCTGCTCTGA
Upstream 100 bases:
>100_bases CCGCGAACTGGCGAAACTGGTCGGTGAAATGGTCAGGGCAGAGATGGAACGGCGCGCCCGTGCCGGACGTGGCAGTTTTT ACGATAAAGATTGAGGAGTC
Downstream 100 bases:
>100_bases TTTAACGTATGTCGCCAATTTCCTGATGAAGGTGACTGGCGACTTGCTGTTGTATGTCCTTCTCAGAAAATTGTTTTTGA ATAATAAACAACAGGATTTT
Product: putative tail fiber protein
Products: NA
Alternate protein names: Phage Tail Protein; Phage P2 GpU; Phage-Related Tail Protein; Phage P2 GpU Family Protein; Phage Tail Protein U; Tail Fiber Protein; Phage-Related Protein; Phage Protein U; Phage Tail Assembly Protein; Bacteriophage Tail Fiber Protein U; Bacteriophage Tail Protein U; Phage P2 GpU Protein; Prophage Tail Protein; Phage-Like Tail Protein; Bacteriophage P2 Phage-Related Tail U Protein; Tail Assembly Protein; Bacteriophage Tail Protein; Fels-2 Prophage Protein; Tail Fiber Protein Of Prophage; Bacteriophage P2 Tail Protein GPU; Phage Tail; Tail Protein
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MVMMMIYGMFVFELRTLPHQQLQQNKSWRHVKNERVNRSASWQYIGAGDDRIVLSGVLYPEITGGEVSLSLLTTQAYTGR PWPLIDGVGQIYGMYVLTETNTTRSEFDRYGKAKKIEFSLTLERCDEDLRERLQSSSFSDMLSGFKDKVTSSLNSAASSV KGLL
Sequences:
>Translated_164_residues MVMMMIYGMFVFELRTLPHQQLQQNKSWRHVKNERVNRSASWQYIGAGDDRIVLSGVLYPEITGGEVSLSLLTTQAYTGR PWPLIDGVGQIYGMYVLTETNTTRSEFDRYGKAKKIEFSLTLERCDEDLRERLQSSSFSDMLSGFKDKVTSSLNSAASSV KGLL >Mature_164_residues MVMMMIYGMFVFELRTLPHQQLQQNKSWRHVKNERVNRSASWQYIGAGDDRIVLSGVLYPEITGGEVSLSLLTTQAYTGR PWPLIDGVGQIYGMYVLTETNTTRSEFDRYGKAKKIEFSLTLERCDEDLRERLQSSSFSDMLSGFKDKVTSSLNSAASSV KGLL
Specific function: Unknown
COG id: COG3499
COG function: function code R; Phage protein U
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18604; Mature: 18604
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMMMIYGMFVFELRTLPHQQLQQNKSWRHVKNERVNRSASWQYIGAGDDRIVLSGVLYP CHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCEEEEEEEECC EITGGEVSLSLLTTQAYTGRPWPLIDGVGQIYGMYVLTETNTTRSEFDRYGKAKKIEFSL CCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHEEEEEEECCCCHHHHHHCCCCEEEEEEE TLERCDEDLRERLQSSSFSDMLSGFKDKVTSSLNSAASSVKGLL EHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVMMMIYGMFVFELRTLPHQQLQQNKSWRHVKNERVNRSASWQYIGAGDDRIVLSGVLYP CHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCEEEEEEEECC EITGGEVSLSLLTTQAYTGRPWPLIDGVGQIYGMYVLTETNTTRSEFDRYGKAKKIEFSL CCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHEEEEEEECCCCHHHHHHCCCCEEEEEEE TLERCDEDLRERLQSSSFSDMLSGFKDKVTSSLNSAASSVKGLL EHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA