| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is N
Identifier: 218695494
GI number: 218695494
Start: 2156502
End: 2157554
Strand: Direct
Name: N
Synonym: EC55989_2107
Alternate gene names: NA
Gene position: 2156502-2157554 (Clockwise)
Preceding gene: 218695493
Following gene: 218695495
Centisome position: 41.83
GC content: 53.66
Gene sequence:
>1053_bases ATGAATCTGGTGATGTCAGATATTACCCGCAACAAGCTGGGTTGCTATATGGCGCAGCAGGCGTCGCTTAACAATATCCC GGTATCTGCACTGGTATCGCGATTTACCGTGGAACCCGCGGTGCAGCAGCGTTTTGAAAACGCCTCAAAGGAAAGTACCG AATTTACGAAAAGAATTAACGTGATCGGCGTGACCGACCAGAAAGGCGAAAAAATCCTCCCGGACACCACCGGGCCAATT GCGCGCACGAATAGCAGTTATGACGGCATCAAACGCCGTAACCCGAATAACGTGATCGATATGAAGTCTCGTCAGTACCA GTGCGAACAGGTGAACTACGATACCTTTATTTCGTACCCACAGCTTGATACCTGGGCGGCCCACAGCGATTTTCAGTCCC GTATCAGTACACAGATCGCCCGGCAGGTAGCGCTTGATCGCATCATGATTGGCTTTAACGGCACATCCCACGCCTACGAG TCTGATTTTCACACCAACAAGCTGCTTCAGGACGTTAACGTGGGCTGGCTGGAGCACATCAGAACCGATGCCAGCGAGCG CGTAATGAATGACGTGACGCTGACCTCCCGCAACATGGACAACACTGTGGCGCACGTGGGTAAGTATGCGAATGCCGATG CTCTGGTACAGGATGCGCGCTCATCCCTGCTGGATGAATGGCACAAGGAAGCTGACGACCTCGCGGTGATTATGGGGCGC AACCTGTTTAACTCGCTGCGTCTGCCCGTGCTGAACAGCATCAGCGGCCAGAATCCCAATGCGGAATTACTTGCCGGGCA GCTCATCCTGTCATCGCGCACCATTGGCGGGCTGGGCGTGTTCCTTGCGCCGTTCTTCCCGGATGCAACGATGCTTATCA CCTCGTTCAACAACCTGTCGATTTACTGGCAGAAAGGTTCAATGCGTCGCCTGATGAAAGACGAGCCGGAATACAACCGC ATCGCCACCTACCAGTCCATCAATGACGCTTATGTCGTTGAAGACTATGGCAAGTGCGCGATGATCACTGGCCTGAAGTT CGCCGACAGCTAA
Upstream 100 bases:
>100_bases TGCGCACGCAGGACGGCGATCCGCAGAACCGCTTCACCGCAACAGGCGCAGCCTCCGACCAGCTGGCTGACTTCTGATAA GACAAAGGAGCAAATTTTTT
Downstream 100 bases:
>100_bases TCAACTCACGGCGGGCATCATGCCCGCCTGTAACGGAGAGAAAAAATGATTACTCCTGCACAACAACACTGGCAGAACGT GATGGCACAGCGCGCAGGCC
Product: Major capsid protein precursor (GpN)
Products: NA
Alternate protein names: Capsid Protein; Phage Capsid Protein P2 Family; Capsid Proteins; Phage Capsid Protein; Phage Capsid Protein; Capsid; Bacteriophage Capsid Protein; Gp2 Phage Capsid Protein P2 Family Protein; Phage-Related Capsid Protein; Prophage; Phage P2 Capsid GpN-Like Protein; Minor Capsid / Capsid Protein N*; Phage Capsid-Like Protein; Prophage Capsid Protein; Phage-Related Capsid Protein; Phage Gene; Bacteriophage Protein; Phage-Related Capsid Completion Protein; Phage Protein; Bacteriophage Capsid Protein N; Capsid-Like Protein; Capsid Protein Phage Origin; Phage Capsid Protein N; Phage Capsid Family
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MNLVMSDITRNKLGCYMAQQASLNNIPVSALVSRFTVEPAVQQRFENASKESTEFTKRINVIGVTDQKGEKILPDTTGPI ARTNSSYDGIKRRNPNNVIDMKSRQYQCEQVNYDTFISYPQLDTWAAHSDFQSRISTQIARQVALDRIMIGFNGTSHAYE SDFHTNKLLQDVNVGWLEHIRTDASERVMNDVTLTSRNMDNTVAHVGKYANADALVQDARSSLLDEWHKEADDLAVIMGR NLFNSLRLPVLNSISGQNPNAELLAGQLILSSRTIGGLGVFLAPFFPDATMLITSFNNLSIYWQKGSMRRLMKDEPEYNR IATYQSINDAYVVEDYGKCAMITGLKFADS
Sequences:
>Translated_350_residues MNLVMSDITRNKLGCYMAQQASLNNIPVSALVSRFTVEPAVQQRFENASKESTEFTKRINVIGVTDQKGEKILPDTTGPI ARTNSSYDGIKRRNPNNVIDMKSRQYQCEQVNYDTFISYPQLDTWAAHSDFQSRISTQIARQVALDRIMIGFNGTSHAYE SDFHTNKLLQDVNVGWLEHIRTDASERVMNDVTLTSRNMDNTVAHVGKYANADALVQDARSSLLDEWHKEADDLAVIMGR NLFNSLRLPVLNSISGQNPNAELLAGQLILSSRTIGGLGVFLAPFFPDATMLITSFNNLSIYWQKGSMRRLMKDEPEYNR IATYQSINDAYVVEDYGKCAMITGLKFADS >Mature_350_residues MNLVMSDITRNKLGCYMAQQASLNNIPVSALVSRFTVEPAVQQRFENASKESTEFTKRINVIGVTDQKGEKILPDTTGPI ARTNSSYDGIKRRNPNNVIDMKSRQYQCEQVNYDTFISYPQLDTWAAHSDFQSRISTQIARQVALDRIMIGFNGTSHAYE SDFHTNKLLQDVNVGWLEHIRTDASERVMNDVTLTSRNMDNTVAHVGKYANADALVQDARSSLLDEWHKEADDLAVIMGR NLFNSLRLPVLNSISGQNPNAELLAGQLILSSRTIGGLGVFLAPFFPDATMLITSFNNLSIYWQKGSMRRLMKDEPEYNR IATYQSINDAYVVEDYGKCAMITGLKFADS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39331; Mature: 39331
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLVMSDITRNKLGCYMAQQASLNNIPVSALVSRFTVEPAVQQRFENASKESTEFTKRIN CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHEE VIGVTDQKGEKILPDTTGPIARTNSSYDGIKRRNPNNVIDMKSRQYQCEQVNYDTFISYP EEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHCCCHHEECCC QLDTWAAHSDFQSRISTQIARQVALDRIMIGFNGTSHAYESDFHTNKLLQDVNVGWLEHI CCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHCCHHHHHHH RTDASERVMNDVTLTSRNMDNTVAHVGKYANADALVQDARSSLLDEWHKEADDLAVIMGR HCCHHHHHHHHHEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEHHHH NLFNSLRLPVLNSISGQNPNAELLAGQLILSSRTIGGLGVFLAPFFPDATMLITSFNNLS HHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEEEECCCEE IYWQKGSMRRLMKDEPEYNRIATYQSINDAYVVEDYGKCAMITGLKFADS EEEECCCHHHHHCCCCCCCCEEHHHCCCCEEEEECCCCEEEEECCEECCC >Mature Secondary Structure MNLVMSDITRNKLGCYMAQQASLNNIPVSALVSRFTVEPAVQQRFENASKESTEFTKRIN CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHEE VIGVTDQKGEKILPDTTGPIARTNSSYDGIKRRNPNNVIDMKSRQYQCEQVNYDTFISYP EEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHCCCHHEECCC QLDTWAAHSDFQSRISTQIARQVALDRIMIGFNGTSHAYESDFHTNKLLQDVNVGWLEHI CCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHCCHHHHHHH RTDASERVMNDVTLTSRNMDNTVAHVGKYANADALVQDARSSLLDEWHKEADDLAVIMGR HCCHHHHHHHHHEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEHHHH NLFNSLRLPVLNSISGQNPNAELLAGQLILSSRTIGGLGVFLAPFFPDATMLITSFNNLS HHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEEEECCCEE IYWQKGSMRRLMKDEPEYNRIATYQSINDAYVVEDYGKCAMITGLKFADS EEEECCCHHHHHCCCCCCCCEEHHHCCCCEEEEECCCCEEEEECCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA