Definition Escherichia coli 55989, complete genome.
Accession NC_011748
Length 5,154,862

Click here to switch to the map view.

The map label for this gene is N

Identifier: 218695494

GI number: 218695494

Start: 2156502

End: 2157554

Strand: Direct

Name: N

Synonym: EC55989_2107

Alternate gene names: NA

Gene position: 2156502-2157554 (Clockwise)

Preceding gene: 218695493

Following gene: 218695495

Centisome position: 41.83

GC content: 53.66

Gene sequence:

>1053_bases
ATGAATCTGGTGATGTCAGATATTACCCGCAACAAGCTGGGTTGCTATATGGCGCAGCAGGCGTCGCTTAACAATATCCC
GGTATCTGCACTGGTATCGCGATTTACCGTGGAACCCGCGGTGCAGCAGCGTTTTGAAAACGCCTCAAAGGAAAGTACCG
AATTTACGAAAAGAATTAACGTGATCGGCGTGACCGACCAGAAAGGCGAAAAAATCCTCCCGGACACCACCGGGCCAATT
GCGCGCACGAATAGCAGTTATGACGGCATCAAACGCCGTAACCCGAATAACGTGATCGATATGAAGTCTCGTCAGTACCA
GTGCGAACAGGTGAACTACGATACCTTTATTTCGTACCCACAGCTTGATACCTGGGCGGCCCACAGCGATTTTCAGTCCC
GTATCAGTACACAGATCGCCCGGCAGGTAGCGCTTGATCGCATCATGATTGGCTTTAACGGCACATCCCACGCCTACGAG
TCTGATTTTCACACCAACAAGCTGCTTCAGGACGTTAACGTGGGCTGGCTGGAGCACATCAGAACCGATGCCAGCGAGCG
CGTAATGAATGACGTGACGCTGACCTCCCGCAACATGGACAACACTGTGGCGCACGTGGGTAAGTATGCGAATGCCGATG
CTCTGGTACAGGATGCGCGCTCATCCCTGCTGGATGAATGGCACAAGGAAGCTGACGACCTCGCGGTGATTATGGGGCGC
AACCTGTTTAACTCGCTGCGTCTGCCCGTGCTGAACAGCATCAGCGGCCAGAATCCCAATGCGGAATTACTTGCCGGGCA
GCTCATCCTGTCATCGCGCACCATTGGCGGGCTGGGCGTGTTCCTTGCGCCGTTCTTCCCGGATGCAACGATGCTTATCA
CCTCGTTCAACAACCTGTCGATTTACTGGCAGAAAGGTTCAATGCGTCGCCTGATGAAAGACGAGCCGGAATACAACCGC
ATCGCCACCTACCAGTCCATCAATGACGCTTATGTCGTTGAAGACTATGGCAAGTGCGCGATGATCACTGGCCTGAAGTT
CGCCGACAGCTAA

Upstream 100 bases:

>100_bases
TGCGCACGCAGGACGGCGATCCGCAGAACCGCTTCACCGCAACAGGCGCAGCCTCCGACCAGCTGGCTGACTTCTGATAA
GACAAAGGAGCAAATTTTTT

Downstream 100 bases:

>100_bases
TCAACTCACGGCGGGCATCATGCCCGCCTGTAACGGAGAGAAAAAATGATTACTCCTGCACAACAACACTGGCAGAACGT
GATGGCACAGCGCGCAGGCC

Product: Major capsid protein precursor (GpN)

Products: NA

Alternate protein names: Capsid Protein; Phage Capsid Protein P2 Family; Capsid Proteins; Phage Capsid Protein; Phage Capsid Protein; Capsid; Bacteriophage Capsid Protein; Gp2 Phage Capsid Protein P2 Family Protein; Phage-Related Capsid Protein; Prophage; Phage P2 Capsid GpN-Like Protein; Minor Capsid / Capsid Protein N*; Phage Capsid-Like Protein; Prophage Capsid Protein; Phage-Related Capsid Protein; Phage Gene; Bacteriophage Protein; Phage-Related Capsid Completion Protein; Phage Protein; Bacteriophage Capsid Protein N; Capsid-Like Protein; Capsid Protein Phage Origin; Phage Capsid Protein N; Phage Capsid Family

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MNLVMSDITRNKLGCYMAQQASLNNIPVSALVSRFTVEPAVQQRFENASKESTEFTKRINVIGVTDQKGEKILPDTTGPI
ARTNSSYDGIKRRNPNNVIDMKSRQYQCEQVNYDTFISYPQLDTWAAHSDFQSRISTQIARQVALDRIMIGFNGTSHAYE
SDFHTNKLLQDVNVGWLEHIRTDASERVMNDVTLTSRNMDNTVAHVGKYANADALVQDARSSLLDEWHKEADDLAVIMGR
NLFNSLRLPVLNSISGQNPNAELLAGQLILSSRTIGGLGVFLAPFFPDATMLITSFNNLSIYWQKGSMRRLMKDEPEYNR
IATYQSINDAYVVEDYGKCAMITGLKFADS

Sequences:

>Translated_350_residues
MNLVMSDITRNKLGCYMAQQASLNNIPVSALVSRFTVEPAVQQRFENASKESTEFTKRINVIGVTDQKGEKILPDTTGPI
ARTNSSYDGIKRRNPNNVIDMKSRQYQCEQVNYDTFISYPQLDTWAAHSDFQSRISTQIARQVALDRIMIGFNGTSHAYE
SDFHTNKLLQDVNVGWLEHIRTDASERVMNDVTLTSRNMDNTVAHVGKYANADALVQDARSSLLDEWHKEADDLAVIMGR
NLFNSLRLPVLNSISGQNPNAELLAGQLILSSRTIGGLGVFLAPFFPDATMLITSFNNLSIYWQKGSMRRLMKDEPEYNR
IATYQSINDAYVVEDYGKCAMITGLKFADS
>Mature_350_residues
MNLVMSDITRNKLGCYMAQQASLNNIPVSALVSRFTVEPAVQQRFENASKESTEFTKRINVIGVTDQKGEKILPDTTGPI
ARTNSSYDGIKRRNPNNVIDMKSRQYQCEQVNYDTFISYPQLDTWAAHSDFQSRISTQIARQVALDRIMIGFNGTSHAYE
SDFHTNKLLQDVNVGWLEHIRTDASERVMNDVTLTSRNMDNTVAHVGKYANADALVQDARSSLLDEWHKEADDLAVIMGR
NLFNSLRLPVLNSISGQNPNAELLAGQLILSSRTIGGLGVFLAPFFPDATMLITSFNNLSIYWQKGSMRRLMKDEPEYNR
IATYQSINDAYVVEDYGKCAMITGLKFADS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39331; Mature: 39331

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLVMSDITRNKLGCYMAQQASLNNIPVSALVSRFTVEPAVQQRFENASKESTEFTKRIN
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHEE
VIGVTDQKGEKILPDTTGPIARTNSSYDGIKRRNPNNVIDMKSRQYQCEQVNYDTFISYP
EEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHCCCHHEECCC
QLDTWAAHSDFQSRISTQIARQVALDRIMIGFNGTSHAYESDFHTNKLLQDVNVGWLEHI
CCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHCCHHHHHHH
RTDASERVMNDVTLTSRNMDNTVAHVGKYANADALVQDARSSLLDEWHKEADDLAVIMGR
HCCHHHHHHHHHEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEHHHH
NLFNSLRLPVLNSISGQNPNAELLAGQLILSSRTIGGLGVFLAPFFPDATMLITSFNNLS
HHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEEEECCCEE
IYWQKGSMRRLMKDEPEYNRIATYQSINDAYVVEDYGKCAMITGLKFADS
EEEECCCHHHHHCCCCCCCCEEHHHCCCCEEEEECCCCEEEEECCEECCC
>Mature Secondary Structure
MNLVMSDITRNKLGCYMAQQASLNNIPVSALVSRFTVEPAVQQRFENASKESTEFTKRIN
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHEE
VIGVTDQKGEKILPDTTGPIARTNSSYDGIKRRNPNNVIDMKSRQYQCEQVNYDTFISYP
EEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHCCCHHEECCC
QLDTWAAHSDFQSRISTQIARQVALDRIMIGFNGTSHAYESDFHTNKLLQDVNVGWLEHI
CCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHCCHHHHHHH
RTDASERVMNDVTLTSRNMDNTVAHVGKYANADALVQDARSSLLDEWHKEADDLAVIMGR
HCCHHHHHHHHHEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEHHHH
NLFNSLRLPVLNSISGQNPNAELLAGQLILSSRTIGGLGVFLAPFFPDATMLITSFNNLS
HHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEEEECCCEE
IYWQKGSMRRLMKDEPEYNRIATYQSINDAYVVEDYGKCAMITGLKFADS
EEEECCCHHHHHCCCCCCCCEEHHHCCCCEEEEECCCCEEEEECCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA