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The map label for this gene is int

Identifier: 218695473

GI number: 218695473

Start: 2142257

End: 2143258

Strand: Reverse

Name: int

Synonym: EC55989_2086

Alternate gene names: 218695473

Gene position: 2143258-2142257 (Counterclockwise)

Preceding gene: 218695474

Following gene: 218695472

Centisome position: 41.58

GC content: 44.81

Gene sequence:

>1002_bases
ATGTCGGTTCGTAAGATTACATCAGGTAAATGGCTTTGCGAATGTTATCCCTACGGGGCATCGGGAAAACGCATTCGTAA
ACAGTTTGCGACAAAAAGTGAGGCGCTCTCTTATGAGCGCCGTATAATGAATAGTAGAGTTGGAGACGAGTTTCAAGATG
GTTCTGGTCCTCGTCTTTCTGAGTTGATTGCTCGTTGGTTTGAGATGTACGGTAAAACCTTGTCCTCTGGTGCAGAGCGC
AAAGTCAAACTTGAGGCGATTTGTTCCAGGCTGGGAGATCCATTTGCTTCTCAGTTTGACAAAAATATGTTTGCTACTTA
TCGGGAAAGAAGGCTATCAGGAGAATGGAATCCCAAGGGGAAGAAAAAACTTAGTGAAGCAACCGTTAATCGCGAGCAGT
CATATCTACATGCTGTTTTTGCCGAACTGAAGCGCCTTGGGGAGTGGTCTGGTGAAAACCCCCTGACTGGTATTCGCAAG
TTTCGTGAGGAAGAAAAGGAACTGGCGTTTCTGTATGTAGATGAGATTGAACGCCTTCTGATTGCGTGTGATGAGTCACG
GAATAAAGATTTGGGGGTTGTTGTCCGTATTGGGCTTGCGACGGGTGCTCGGTGGAGTGAAGCAGAAGGATTAAAGCAAT
CTCAAGTACTGCCCGGTCGAATCACATTTGTTAAAACTAAAGGAAAGAAGAACCGCACTGTACCGATTTCACCTCAATTG
CAGGCTATACTTCCTAAAAAACGAGGAGCGCTATTTTCACCATGTTATGAGGCTTTTGACGCTGCAATTAAGAGAGCGAA
GATCGAGCTTCCTGATGGGCAATTAACTCATGTGCTACGTCACACGTTTGCCAGTCATTTTATGATGCGGGGCGGAAATA
TTCTTGTGTTGCAAAAAATACTGGGGCATAGCGATATAAAAATGACTATGCGTTATGCGCATTTTGCTCCAGGTCATTTA
GAGGCTGCTGTTGAATTGAACCCTTTTGACAATAGAGGGTAA

Upstream 100 bases:

>100_bases
ATAATCCATTTTGGCTAGATAATGATGCCGCCCCAGGGTTAAAAAAGACTCTGGGGGATGTCACTAAGGCTGCATTTGAT
TTATGTGATAAGTAACTAAA

Downstream 100 bases:

>100_bases
AAAGTGGCGATAAAAAGTGACAATAGATTCAAATGGCGTTGTATAGAGCCATTTTCAAAGTTAATAAAATCATAAGGTTA
TGATTTATAAATGGTGGTTG

Product: Integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MSVRKITSGKWLCECYPYGASGKRIRKQFATKSEALSYERRIMNSRVGDEFQDGSGPRLSELIARWFEMYGKTLSSGAER
KVKLEAICSRLGDPFASQFDKNMFATYRERRLSGEWNPKGKKKLSEATVNREQSYLHAVFAELKRLGEWSGENPLTGIRK
FREEEKELAFLYVDEIERLLIACDESRNKDLGVVVRIGLATGARWSEAEGLKQSQVLPGRITFVKTKGKKNRTVPISPQL
QAILPKKRGALFSPCYEAFDAAIKRAKIELPDGQLTHVLRHTFASHFMMRGGNILVLQKILGHSDIKMTMRYAHFAPGHL
EAAVELNPFDNRG

Sequences:

>Translated_333_residues
MSVRKITSGKWLCECYPYGASGKRIRKQFATKSEALSYERRIMNSRVGDEFQDGSGPRLSELIARWFEMYGKTLSSGAER
KVKLEAICSRLGDPFASQFDKNMFATYRERRLSGEWNPKGKKKLSEATVNREQSYLHAVFAELKRLGEWSGENPLTGIRK
FREEEKELAFLYVDEIERLLIACDESRNKDLGVVVRIGLATGARWSEAEGLKQSQVLPGRITFVKTKGKKNRTVPISPQL
QAILPKKRGALFSPCYEAFDAAIKRAKIELPDGQLTHVLRHTFASHFMMRGGNILVLQKILGHSDIKMTMRYAHFAPGHL
EAAVELNPFDNRG
>Mature_332_residues
SVRKITSGKWLCECYPYGASGKRIRKQFATKSEALSYERRIMNSRVGDEFQDGSGPRLSELIARWFEMYGKTLSSGAERK
VKLEAICSRLGDPFASQFDKNMFATYRERRLSGEWNPKGKKKLSEATVNREQSYLHAVFAELKRLGEWSGENPLTGIRKF
REEEKELAFLYVDEIERLLIACDESRNKDLGVVVRIGLATGARWSEAEGLKQSQVLPGRITFVKTKGKKNRTVPISPQLQ
AILPKKRGALFSPCYEAFDAAIKRAKIELPDGQLTHVLRHTFASHFMMRGGNILVLQKILGHSDIKMTMRYAHFAPGHLE
AAVELNPFDNRG

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerD subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107
- InterPro:   IPR011932 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 37791; Mature: 37660

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRKITSGKWLCECYPYGASGKRIRKQFATKSEALSYERRIMNSRVGDEFQDGSGPRLS
CCCCEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
ELIARWFEMYGKTLSSGAERKVKLEAICSRLGDPFASQFDKNMFATYRERRLSGEWNPKG
HHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCH
KKKLSEATVNREQSYLHAVFAELKRLGEWSGENPLTGIRKFREEEKELAFLYVDEIERLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEEEHHHHHHHH
IACDESRNKDLGVVVRIGLATGARWSEAEGLKQSQVLPGRITFVKTKGKKNRTVPISPQL
HHHCCCCCCCCEEEEEEECCCCCCCCHHCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCH
QAILPKKRGALFSPCYEAFDAAIKRAKIELPDGQLTHVLRHTFASHFMMRGGNILVLQKI
HHHCCHHCCCHHHHHHHHHHHHHHHCEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEHHH
LGHSDIKMTMRYAHFAPGHLEAAVELNPFDNRG
HCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure 
SVRKITSGKWLCECYPYGASGKRIRKQFATKSEALSYERRIMNSRVGDEFQDGSGPRLS
CCCEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
ELIARWFEMYGKTLSSGAERKVKLEAICSRLGDPFASQFDKNMFATYRERRLSGEWNPKG
HHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCH
KKKLSEATVNREQSYLHAVFAELKRLGEWSGENPLTGIRKFREEEKELAFLYVDEIERLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEEEHHHHHHHH
IACDESRNKDLGVVVRIGLATGARWSEAEGLKQSQVLPGRITFVKTKGKKNRTVPISPQL
HHHCCCCCCCCEEEEEEECCCCCCCCHHCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCH
QAILPKKRGALFSPCYEAFDAAIKRAKIELPDGQLTHVLRHTFASHFMMRGGNILVLQKI
HHHCCHHCCCHHHHHHHHHHHHHHHCEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEHHH
LGHSDIKMTMRYAHFAPGHLEAAVELNPFDNRG
HCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA