Definition | Escherichia coli 55989, complete genome. |
---|---|
Accession | NC_011748 |
Length | 5,154,862 |
Click here to switch to the map view.
The map label for this gene is otsB
Identifier: 218695461
GI number: 218695461
Start: 2131868
End: 2132668
Strand: Reverse
Name: otsB
Synonym: EC55989_2074
Alternate gene names: 218695461
Gene position: 2132668-2131868 (Counterclockwise)
Preceding gene: 218695462
Following gene: 218695460
Centisome position: 41.37
GC content: 51.31
Gene sequence:
>801_bases GTGACAGAACCGTTAACCGAAACCCCTGAACTATCCGCGAAATATGCCTGGTTTTTTGATCTCGATGGAACGCTGGCGGA AATCAAACCGCATCCCGATCAGGTCGTCGTGCCTGACAACATTCTGCAAGGACTACAGCTACTGGCAACCGCAAGTGATG GTGCATTGGCATTGATATCAGGGCGCTCAATGGTGGAGCTTGACGCACTGGCAAAACCTTATCGCTTCCCGTTAGCGGGC GTGCATGGGGCGGAGCGCCGTGACATCAATGGTAAAACACATATCGTTCATCTGCCGGATGCGATTGCGCGTGATATTAG CGTGCAACTGCATACGGTCATCGCCCAGTATCCCGGTGCGGAGCTGGAGACGAAAGGGATGGCCTTTGCGCTGCATTATC GTCAGGCTCCGCAGCATGAAGACGCATTAATGACATTAGCGCAACGTATTACTCAGATCTGGCCACAAATGGCGTTACAG CAGGGAAAGTGTGTTGTCGAGATCAAACCGAGAGGTACCAGTAAAGGTGAGGCGATTGCAGCTTTTATGCAGGAAGCTCC CTTTATCGGGCGAACGCCCGTATTTCTGGGCGATGATTTAACCGATGAATCTGGCTTCGCAGCCGTTAACCGGCTGGGCG GAATGTCAGTAAAAATTGGCACAGGTGCAACTCAGGCATCATGGCGACTGGCGGGTGTGCCGGATGTCTGGAGCTGGCTT GAAATGATAACCACCGCATTACAACAAAAAAGAGAAAATAACAGGAGTGATGACTATGAGTCGTTTAGTCGTAGTATCTA A
Upstream 100 bases:
>100_bases CTTCGTTGCAAATGGCGACCCCCGTCACACTGTCTATACTTACATGTCTGTAAAGCGCGTTCTGCGCAACACAATAAGAA AAGAGAAGGAGGAGAACCGG
Downstream 100 bases:
>100_bases CCGGATTGCACCACCAGACGAGCACGCCGCCAGTGCCGGTGGCCTTGCCGTTGGCATACTGGGGGCACTGAAAGCCGCAG GCGGACTGTGGTTTGGCTGG
Product: trehalose-6-phosphate phosphatase
Products: NA
Alternate protein names: TPP; Osmoregulatory trehalose synthesis protein B; Trehalose 6-phosphate phosphatase; Trehalose-phosphatase [H]
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MTEPLTETPELSAKYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATASDGALALISGRSMVELDALAKPYRFPLAG VHGAERRDINGKTHIVHLPDAIARDISVQLHTVIAQYPGAELETKGMAFALHYRQAPQHEDALMTLAQRITQIWPQMALQ QGKCVVEIKPRGTSKGEAIAAFMQEAPFIGRTPVFLGDDLTDESGFAAVNRLGGMSVKIGTGATQASWRLAGVPDVWSWL EMITTALQQKRENNRSDDYESFSRSI
Sequences:
>Translated_266_residues MTEPLTETPELSAKYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATASDGALALISGRSMVELDALAKPYRFPLAG VHGAERRDINGKTHIVHLPDAIARDISVQLHTVIAQYPGAELETKGMAFALHYRQAPQHEDALMTLAQRITQIWPQMALQ QGKCVVEIKPRGTSKGEAIAAFMQEAPFIGRTPVFLGDDLTDESGFAAVNRLGGMSVKIGTGATQASWRLAGVPDVWSWL EMITTALQQKRENNRSDDYESFSRSI >Mature_265_residues TEPLTETPELSAKYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATASDGALALISGRSMVELDALAKPYRFPLAGV HGAERRDINGKTHIVHLPDAIARDISVQLHTVIAQYPGAELETKGMAFALHYRQAPQHEDALMTLAQRITQIWPQMALQQ GKCVVEIKPRGTSKGEAIAAFMQEAPFIGRTPVFLGDDLTDESGFAAVNRLGGMSVKIGTGATQASWRLAGVPDVWSWLE MITTALQQKRENNRSDDYESFSRSI
Specific function: Removes the phosphate from trehalose 6-phosphate to produce free trehalose [H]
COG id: COG1877
COG function: function code G; Trehalose-6-phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trehalose phosphatase family [H]
Homologues:
Organism=Escherichia coli, GI1788207, Length=266, Percent_Identity=99.2481203007519, Blast_Score=545, Evalue=1e-156, Organism=Drosophila melanogaster, GI19920676, Length=259, Percent_Identity=27.027027027027, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI221473368, Length=239, Percent_Identity=28.8702928870293, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI20129307, Length=239, Percent_Identity=28.8702928870293, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI24582490, Length=239, Percent_Identity=28.8702928870293, Blast_Score=67, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR003337 [H]
Pfam domain/function: PF02358 Trehalose_PPase [H]
EC number: =3.1.3.12 [H]
Molecular weight: Translated: 29178; Mature: 29046
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPLTETPELSAKYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATASDGALALIS CCCCCCCCCCCCEEEEEEEECCCCCEECCCCCCCEECCHHHHHHHHHHHCCCCCEEEEEC GRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTVIAQYPGA CCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCC ELETKGMAFALHYRQAPQHEDALMTLAQRITQIWPQMALQQGKCVVEIKPRGTSKGEAIA CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHH AFMQEAPFIGRTPVFLGDDLTDESGFAAVNRLGGMSVKIGTGATQASWRLAGVPDVWSWL HHHHHCCCCCCCCEEECCCCCCCCCHHHHHHCCCCEEEECCCCCCCCEEECCCCHHHHHH EMITTALQQKRENNRSDDYESFSRSI HHHHHHHHHHHHCCCCCCHHHHHCCC >Mature Secondary Structure TEPLTETPELSAKYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATASDGALALIS CCCCCCCCCCCEEEEEEEECCCCCEECCCCCCCEECCHHHHHHHHHHHCCCCCEEEEEC GRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTVIAQYPGA CCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCC ELETKGMAFALHYRQAPQHEDALMTLAQRITQIWPQMALQQGKCVVEIKPRGTSKGEAIA CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHH AFMQEAPFIGRTPVFLGDDLTDESGFAAVNRLGGMSVKIGTGATQASWRLAGVPDVWSWL HHHHHCCCCCCCCEEECCCCCCCCCHHHHHHCCCCEEEECCCCCCCCEEECCCCHHHHHH EMITTALQQKRENNRSDDYESFSRSI HHHHHHHHHHHHCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8045430; 9097040; 9278503 [H]