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The map label for this gene is yciN

Identifier: 218694844

GI number: 218694844

Start: 1472145

End: 1472396

Strand: Reverse

Name: yciN

Synonym: EC55989_1430

Alternate gene names: 218694844

Gene position: 1472396-1472145 (Counterclockwise)

Preceding gene: 218694852

Following gene: 218694842

Centisome position: 28.56

GC content: 47.22

Gene sequence:

>252_bases
ATGAACAAAGAGACACAACCCATCGACCGCGAAACGCTGTTGAAAGAGGCCAACAAAATCATTCGTGAGCATGAGGATAC
GCTCGCAGGGATTGAAGCCACCGGCGTCACGCAGCGTAATGGCGTGCTGGTATTTACCGGCGACTACTTTTTAGATGAAC
AAGGATTGCCAACAGCCAAAAGCACCGCGGTGTTTAATATGTTCAAACACCTGGCCCATGTGCTTTCAGAAAAATATCAT
CTGGTTGATTAA

Upstream 100 bases:

>100_bases
AATCCAAAGTTACCAGTAAGGCGCTCTTGCCACCAGCGTGGTATATTTGTCTGCAAGCCATGCCTGGCGTAGACTAATGT
CCTTGTTTAAGGAGTAAATA

Downstream 100 bases:

>100_bases
AGCAAAACGCGAGGTCTTAGCCTCGCGTTTGTCTTTTACATCAATGGCTTTTGACCCCGCTGCCACCAGCGTAGCAACAA
TCGATCGGCGCTCTCTGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MNKETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLVFTGDYFLDEQGLPTAKSTAVFNMFKHLAHVLSEKYH
LVD

Sequences:

>Translated_83_residues
MNKETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLVFTGDYFLDEQGLPTAKSTAVFNMFKHLAHVLSEKYH
LVD
>Mature_83_residues
MNKETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLVFTGDYFLDEQGLPTAKSTAVFNMFKHLAHVLSEKYH
LVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787528, Length=83, Percent_Identity=100, Blast_Score=172, Evalue=4e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YCIN_ECO57 (P0AB63)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   B85760
- PIR:   E90859
- RefSeq:   NP_287926.1
- RefSeq:   NP_309872.1
- ProteinModelPortal:   P0AB63
- SMR:   P0AB63
- EnsemblBacteria:   EBESCT00000027484
- EnsemblBacteria:   EBESCT00000056353
- GeneID:   912821
- GeneID:   961388
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z2537
- KEGG:   ecs:ECs1845
- GeneTree:   EBGT00050000011711
- HOGENOM:   HBG298212
- OMA:   LVFRGEF
- ProtClustDB:   PRK11037
- BioCyc:   ECOL83334:ECS1845-MONOMER
- InterPro:   IPR019633

Pfam domain/function: PF10692 DUF2498

EC number: NA

Molecular weight: Translated: 9386; Mature: 9386

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLVFTGDYFLDEQGLPTAK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCEEECCCCCCCCH
STAVFNMFKHLAHVLSEKYHLVD
HHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNKETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLVFTGDYFLDEQGLPTAK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCEEECCCCCCCCH
STAVFNMFKHLAHVLSEKYHLVD
HHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796