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The map label for this gene is yliD

Identifier: 218694306

GI number: 218694306

Start: 933265

End: 934176

Strand: Direct

Name: yliD

Synonym: EC55989_0877

Alternate gene names: 218694306

Gene position: 933265-934176 (Clockwise)

Preceding gene: 218694305

Following gene: 218694307

Centisome position: 18.1

GC content: 53.18

Gene sequence:

>912_bases
ATGCGACTATTTAACTGGCGACGTCAGGCGGTGTTAAACGCCATGCCACTGGTCAAACCTGACCAGGTGCGTACACCGTG
GCATGAATTCTGGCGACGATTTCGCCGTCAGCATATGGCGATGACCGCCGCATTATTCGTTATTTTATTGATTGTGGTGG
CCATTTTTGCACGCTGGATCGCTCCCTATGACGCCGAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTG
CAGCACTGGTTTGGCGTCGATTCACTGGGGCGCGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGC
GGGCGTGTTTGCCGTGTTTATCGGTGCGGCGATAGGGACGTTGCTGGGCTTGCTGGCTGGATATTATGAAGGCTGGTGGG
ATCGGCTGATCATGCGCATTTGCGATGTGCTGTTTGCCTTCCCGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTG
GGAAGCGGCATTGCTAACGTGATTATCGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACAC
GCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCATTTTATTGCGTCATA
TCTTGCCTGGGACCGTCTCGTCTATCGTGGTGTTTTTCACCATGCGCATTGGCACCTCGATTATCTCTGCCGCCAGCCTG
TCATTTCTCGGCCTCGGTGCGCAGCCGCCGACACCAGAGTGGGGAGCAATGCTCAATGAGGCACGAGCGGATATGGTTAT
CGCGCCGCATGTCGCTGTTTTTCCGGCCCTGGCTATTTTTCTGACCGTACTGGCGTTCAATTTGTTGGGCGATGGTTTAC
GCGATGCGCTGGATCCGAAAATTAAAGGATAG

Upstream 100 bases:

>100_bases
AGGCGGAAATTCTGCTTTTCTCGCTGGAATTTATTCTTATCAACTTAGTGGTGGATGTGCTTTACGCCGCCATTAACCCG
GCTATCAGGTACAAGTAAGG

Downstream 100 bases:

>100_bases
TTACGTTTGAATATTGCTTGAAAGGGTAATCACCTCACAGGCAATTATTGCCCTAAGCAAGTGTTGTAACTTTCTGCTGA
TTTTGTAGAATCGGGTAATT

Product: putative peptide transporter permease subunit: membrane component of ABC superfamily

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MRLFNWRRQAVLNAMPLVKPDQVRTPWHEFWRRFRRQHMAMTAALFVILLIVVAIFARWIAPYDAENYFDYDNLNNGPSL
QHWFGVDSLGRDIFSRVLVGAQISLAAGVFAVFIGAAIGTLLGLLAGYYEGWWDRLIMRICDVLFAFPGILLAIAVVAVL
GSGIANVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDMTILLRHILPGTVSSIVVFFTMRIGTSIISAASL
SFLGLGAQPPTPEWGAMLNEARADMVIAPHVAVFPALAIFLTVLAFNLLGDGLRDALDPKIKG

Sequences:

>Translated_303_residues
MRLFNWRRQAVLNAMPLVKPDQVRTPWHEFWRRFRRQHMAMTAALFVILLIVVAIFARWIAPYDAENYFDYDNLNNGPSL
QHWFGVDSLGRDIFSRVLVGAQISLAAGVFAVFIGAAIGTLLGLLAGYYEGWWDRLIMRICDVLFAFPGILLAIAVVAVL
GSGIANVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDMTILLRHILPGTVSSIVVFFTMRIGTSIISAASL
SFLGLGAQPPTPEWGAMLNEARADMVIAPHVAVFPALAIFLTVLAFNLLGDGLRDALDPKIKG
>Mature_303_residues
MRLFNWRRQAVLNAMPLVKPDQVRTPWHEFWRRFRRQHMAMTAALFVILLIVVAIFARWIAPYDAENYFDYDNLNNGPSL
QHWFGVDSLGRDIFSRVLVGAQISLAAGVFAVFIGAAIGTLLGLLAGYYEGWWDRLIMRICDVLFAFPGILLAIAVVAVL
GSGIANVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDMTILLRHILPGTVSSIVVFFTMRIGTSIISAASL
SFLGLGAQPPTPEWGAMLNEARADMVIAPHVAVFPALAIFLTVLAFNLLGDGLRDALDPKIKG

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain

Homologues:

Organism=Escherichia coli, GI1787054, Length=303, Percent_Identity=99.6699669966997, Blast_Score=601, Evalue=1e-173,
Organism=Escherichia coli, GI1787760, Length=287, Percent_Identity=40.7665505226481, Blast_Score=216, Evalue=1e-57,
Organism=Escherichia coli, GI1789964, Length=283, Percent_Identity=42.0494699646643, Blast_Score=197, Evalue=6e-52,
Organism=Escherichia coli, GI1789889, Length=245, Percent_Identity=38.3673469387755, Blast_Score=175, Evalue=3e-45,
Organism=Escherichia coli, GI1787498, Length=279, Percent_Identity=36.9175627240143, Blast_Score=172, Evalue=2e-44,
Organism=Escherichia coli, GI1787549, Length=284, Percent_Identity=35.5633802816901, Blast_Score=146, Evalue=2e-36,
Organism=Escherichia coli, GI1788505, Length=225, Percent_Identity=31.1111111111111, Blast_Score=112, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GSID_ECO57 (Q8X6V6)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   B85593
- PIR:   G90742
- RefSeq:   NP_286596.1
- RefSeq:   NP_308938.1
- ProteinModelPortal:   Q8X6V6
- SMR:   Q8X6V6
- EnsemblBacteria:   EBESCT00000027785
- EnsemblBacteria:   EBESCT00000058331
- GeneID:   917649
- GeneID:   958128
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z1056
- KEGG:   ecs:ECs0911
- GeneTree:   EBGT00050000010100
- HOGENOM:   HBG729429
- OMA:   LMLKHMT
- ProtClustDB:   PRK15082
- BioCyc:   ECOL83334:ECS0911-MONOMER
- InterPro:   IPR000515

Pfam domain/function: PF00528 BPD_transp_1

EC number: NA

Molecular weight: Translated: 33253; Mature: 33253

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x17948dbc)-; HASH(0x17bc8128)-; HASH(0x16ffbb98)-; HASH(0x188986ac)-; HASH(0x1842625c)-; HASH(0x178f85b8)-;

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLFNWRRQAVLNAMPLVKPDQVRTPWHEFWRRFRRQHMAMTAALFVILLIVVAIFARWI
CCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APYDAENYFDYDNLNNGPSLQHWFGVDSLGRDIFSRVLVGAQISLAAGVFAVFIGAAIGT
CCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGLLAGYYEGWWDRLIMRICDVLFAFPGILLAIAVVAVLGSGIANVIIAVAIFSIPAFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
RLVRGNTLVLKQQTFIESARSIGASDMTILLRHILPGTVSSIVVFFTMRIGTSIISAASL
HHHCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SFLGLGAQPPTPEWGAMLNEARADMVIAPHVAVFPALAIFLTVLAFNLLGDGLRDALDPK
HHHCCCCCCCCCHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IKG
CCH
>Mature Secondary Structure
MRLFNWRRQAVLNAMPLVKPDQVRTPWHEFWRRFRRQHMAMTAALFVILLIVVAIFARWI
CCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APYDAENYFDYDNLNNGPSLQHWFGVDSLGRDIFSRVLVGAQISLAAGVFAVFIGAAIGT
CCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGLLAGYYEGWWDRLIMRICDVLFAFPGILLAIAVVAVLGSGIANVIIAVAIFSIPAFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
RLVRGNTLVLKQQTFIESARSIGASDMTILLRHILPGTVSSIVVFFTMRIGTSIISAASL
HHHCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SFLGLGAQPPTPEWGAMLNEARADMVIAPHVAVFPALAIFLTVLAFNLLGDGLRDALDPK
HHHCCCCCCCCCHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IKG
CCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796