Definition | Escherichia coli 55989, complete genome. |
---|---|
Accession | NC_011748 |
Length | 5,154,862 |
Click here to switch to the map view.
The map label for this gene is iaaA
Identifier: 218694302
GI number: 218694302
Start: 927943
End: 928908
Strand: Direct
Name: iaaA
Synonym: EC55989_0873
Alternate gene names: 218694302
Gene position: 927943-928908 (Clockwise)
Preceding gene: 218694299
Following gene: 218694303
Centisome position: 18.0
GC content: 56.52
Gene sequence:
>966_bases ATGGGCAAAGCAGTCATTGCAATTCATGGTGGCGCAGGTGCAATTAGCCGCGCGCAGATGAGTCTGCAACAGGAATTACG CTACATTGAGGCGTTGTCTGCCATTGTTGAAACCGGGCAGAAAATGCTGGAAGCGGGCGAAAGTGCGCTGGATGTGGTGA CGGAAGCGGTGCGTCTGCTGGAAGAGTGTCCACTGTTTAACGCCGGAATTGGCGCTGTCTTTACGCGTGATGAAACCCAT GAACTGGACGCCTGTGTGATGGATGGTAACACCCTGAAAGCCGGTGCGGTGGCGGGCGTTAGTCATCTGCGTAATCCGGT TCTTGCCGCCCGGCTGGTGATGGAGCAAAGCCCGCATGTGATGATGATTGGCGAAGGGGCAGAAAATTTTGCGTTTGCTC GTGGCATGGAGCGCGTCTCGCCGGAGATTTTCTCCACGCCTTTGCGTTATGAACAACTACTGGCAGCGCGCAAGGAAGGG GCAACCGTCCTCGACCATAGCGGTGCGCCACTGGATGAAAAACAGAAAATGGGCACCGTGGGGGCCGTGGCGTTGGATTT AGACGGCAATTTGGCGGCAGCCACGTCCACAGGCGGAATGACCAATAAATTACCCGGACGAGTTGGCGATAGTCCCTTAG TGGGTGCCGGATGCTACGCCAATAACGCCAGTGTGGCGGTTTCTTGTACCGGCACGGGCGAAGTCTTCATCCGCGCGCTG GCGGCATATGACATCGCCGCGTTAATGGATTACGGCGGATTAAGTCTCGCGGAAGCCTGCGAGCGGGTAGTAATGGAAAA ACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAG GAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACA CAGTGA
Upstream 100 bases:
>100_bases GCCATATCCATCTTTCTATATTCAAAAATTGAATGAGTAATTCATAAAAATTCTGATATTTATAGCAAAAGTGGCGAGCC ACCCTTAATGGACGAATACT
Downstream 100 bases:
>100_bases TGAACTTGATGCCGGTAATGTGCTGGCGGTTGAAAATCTGAATATTGCCTTTATGCAGGACCAGCAGAAAATAGCTGCGG TCCGCAATCTCTCTTTTAGT
Product: L-asparaginase
Products: NA
Alternate protein names: Beta-aspartyl-peptidase; EcAIII; Isoaspartyl dipeptidase [H]
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MGKAVIAIHGGAGAISRAQMSLQQELRYIEALSAIVETGQKMLEAGESALDVVTEAVRLLEECPLFNAGIGAVFTRDETH ELDACVMDGNTLKAGAVAGVSHLRNPVLAARLVMEQSPHVMMIGEGAENFAFARGMERVSPEIFSTPLRYEQLLAARKEG ATVLDHSGAPLDEKQKMGTVGAVALDLDGNLAAATSTGGMTNKLPGRVGDSPLVGAGCYANNASVAVSCTGTGEVFIRAL AAYDIAALMDYGGLSLAEACERVVMEKLPALGGSGGLIAIDHEGNVALPFNTEGMYRAWGYAGDTPTTGIYREKGDTVAT Q
Sequences:
>Translated_321_residues MGKAVIAIHGGAGAISRAQMSLQQELRYIEALSAIVETGQKMLEAGESALDVVTEAVRLLEECPLFNAGIGAVFTRDETH ELDACVMDGNTLKAGAVAGVSHLRNPVLAARLVMEQSPHVMMIGEGAENFAFARGMERVSPEIFSTPLRYEQLLAARKEG ATVLDHSGAPLDEKQKMGTVGAVALDLDGNLAAATSTGGMTNKLPGRVGDSPLVGAGCYANNASVAVSCTGTGEVFIRAL AAYDIAALMDYGGLSLAEACERVVMEKLPALGGSGGLIAIDHEGNVALPFNTEGMYRAWGYAGDTPTTGIYREKGDTVAT Q >Mature_320_residues GKAVIAIHGGAGAISRAQMSLQQELRYIEALSAIVETGQKMLEAGESALDVVTEAVRLLEECPLFNAGIGAVFTRDETHE LDACVMDGNTLKAGAVAGVSHLRNPVLAARLVMEQSPHVMMIGEGAENFAFARGMERVSPEIFSTPLRYEQLLAARKEGA TVLDHSGAPLDEKQKMGTVGAVALDLDGNLAAATSTGGMTNKLPGRVGDSPLVGAGCYANNASVAVSCTGTGEVFIRALA AYDIAALMDYGGLSLAEACERVVMEKLPALGGSGGLIAIDHEGNVALPFNTEGMYRAWGYAGDTPTTGIYREKGDTVATQ
Specific function: May be involved in glutathione, and possibly other peptide, transport, although these results could also be due to polar effects of disruption [H]
COG id: COG1446
COG function: function code E; Asparaginase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ntn-hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI145275202, Length=301, Percent_Identity=37.5415282392027, Blast_Score=167, Evalue=9e-42, Organism=Homo sapiens, GI145275200, Length=301, Percent_Identity=37.5415282392027, Blast_Score=167, Evalue=9e-42, Organism=Homo sapiens, GI98991769, Length=269, Percent_Identity=32.7137546468402, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI285002251, Length=266, Percent_Identity=28.9473684210526, Blast_Score=89, Evalue=8e-18, Organism=Escherichia coli, GI1787050, Length=321, Percent_Identity=99.6884735202492, Blast_Score=647, Evalue=0.0, Organism=Caenorhabditis elegans, GI17569239, Length=245, Percent_Identity=29.3877551020408, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI32564649, Length=311, Percent_Identity=26.0450160771704, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI18921183, Length=319, Percent_Identity=36.6771159874608, Blast_Score=171, Evalue=6e-43, Organism=Drosophila melanogaster, GI21357893, Length=268, Percent_Identity=30.9701492537313, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI221330102, Length=233, Percent_Identity=33.4763948497854, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI24652135, Length=233, Percent_Identity=33.4763948497854, Blast_Score=105, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000246 [H]
Pfam domain/function: PF01112 Asparaginase_2 [H]
EC number: =3.4.19.5 [H]
Molecular weight: Translated: 33404; Mature: 33273
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKAVIAIHGGAGAISRAQMSLQQELRYIEALSAIVETGQKMLEAGESALDVVTEAVRLL CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH EECPLFNAGIGAVFTRDETHELDACVMDGNTLKAGAVAGVSHLRNPVLAARLVMEQSPHV HHCCCCCCCCCEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCE MMIGEGAENFAFARGMERVSPEIFSTPLRYEQLLAARKEGATVLDHSGAPLDEKQKMGTV EEECCCCCHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHCCCEEEECCCCCCCHHHHCCCE GAVALDLDGNLAAATSTGGMTNKLPGRVGDSPLVGAGCYANNASVAVSCTGTGEVFIRAL EEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCEECCEECCCCEEEEEECCCHHHHHHHH AAYDIAALMDYGGLSLAEACERVVMEKLPALGGSGGLIAIDHEGNVALPFNTEGMYRAWG HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEECCCCCEEECC YAGDTPTTGIYREKGDTVATQ CCCCCCCCCEEECCCCCCCCC >Mature Secondary Structure GKAVIAIHGGAGAISRAQMSLQQELRYIEALSAIVETGQKMLEAGESALDVVTEAVRLL CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH EECPLFNAGIGAVFTRDETHELDACVMDGNTLKAGAVAGVSHLRNPVLAARLVMEQSPHV HHCCCCCCCCCEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCE MMIGEGAENFAFARGMERVSPEIFSTPLRYEQLLAARKEGATVLDHSGAPLDEKQKMGTV EEECCCCCHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHCCCEEEECCCCCCCHHHHCCCE GAVALDLDGNLAAATSTGGMTNKLPGRVGDSPLVGAGCYANNASVAVSCTGTGEVFIRAL EEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCEECCEECCCCEEEEEECCCHHHHHHHH AAYDIAALMDYGGLSLAEACERVVMEKLPALGGSGGLIAIDHEGNVALPFNTEGMYRAWG HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEECCCCCEEECC YAGDTPTTGIYREKGDTVATQ CCCCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 3045084; 7984428 [H]