Click here to switch to the map view.

The map label for this gene is perC [H]

Identifier: 218693738

GI number: 218693738

Start: 305447

End: 305734

Strand: Direct

Name: perC [H]

Synonym: EC55989_0279

Alternate gene names: 218693738

Gene position: 305447-305734 (Clockwise)

Preceding gene: 218693737

Following gene: 218693739

Centisome position: 5.93

GC content: 55.56

Gene sequence:

>288_bases
ATGATTCACGACAGCAAAGCGGAAGCACTGGAAGCGCGTGGACTGTACCGGAGAGCGGCGGCGCGGTGGGCTGAGGTCAT
CATGCTGGCGAATGATGACAAGGCACGGGAACAGGCGGCAAAACGTCGCGCGGAATGTATCCACAAGGCAGCACGCCCAC
CAGCAAGGCAGGATAATTTCGGGGAGATGCGCGAAACCATCAGCCGGGCACATGCCGGGATGGGATTACATCAGCCCAAT
GGTGAGGCATTCAGGAAATACCAAAAAAAGAACAATTGTAGTCAGTAA

Upstream 100 bases:

>100_bases
AGGTGACACCACAGAAACAGAACGAGGCAGAAATGCGGCTGATGGCGCTGAATGAGAAGCGCAAACGCCAGCGCCGGGCA
GCCAGGGAGAAAACAGGCGC

Downstream 100 bases:

>100_bases
CAGAGGATGGGATTCTCTTGGTTTTTTGTTGATGCTTTCTGAGGAAATCTACTACGTTGCTGAGCAGATGAATATTCAAT
TGCATCTGGGTTCCTGATAA

Product: Protein perC (Protein bfpW)

Products: NA

Alternate protein names: Protein BfpW [H]

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MIHDSKAEALEARGLYRRAAARWAEVIMLANDDKAREQAAKRRAECIHKAARPPARQDNFGEMRETISRAHAGMGLHQPN
GEAFRKYQKKNNCSQ

Sequences:

>Translated_95_residues
MIHDSKAEALEARGLYRRAAARWAEVIMLANDDKAREQAAKRRAECIHKAARPPARQDNFGEMRETISRAHAGMGLHQPN
GEAFRKYQKKNNCSQ
>Mature_95_residues
MIHDSKAEALEARGLYRRAAARWAEVIMLANDDKAREQAAKRRAECIHKAARPPARQDNFGEMRETISRAHAGMGLHQPN
GEAFRKYQKKNNCSQ

Specific function: Transcriptional activator of eaeA/bfpA expression in enteropathogenic E.coli [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009277
- ProDom:   PD063034 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10803; Mature: 10803

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHDSKAEALEARGLYRRAAARWAEVIMLANDDKAREQAAKRRAECIHKAARPPARQDNF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCH
GEMRETISRAHAGMGLHQPNGEAFRKYQKKNNCSQ
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIHDSKAEALEARGLYRRAAARWAEVIMLANDDKAREQAAKRRAECIHKAARPPARQDNF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCH
GEMRETISRAHAGMGLHQPNGEAFRKYQKKNNCSQ
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8885267 [H]