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The map label for this gene is ykfJ [H]

Identifier: 218693718

GI number: 218693718

Start: 286557

End: 287723

Strand: Direct

Name: ykfJ [H]

Synonym: EC55989_0259

Alternate gene names: 218693718

Gene position: 286557-287723 (Clockwise)

Preceding gene: 218693716

Following gene: 218693719

Centisome position: 5.56

GC content: 51.67

Gene sequence:

>1167_bases
ATGACGAGTCTATTTACGGAATGGTATATGGGCAATTATATTCGTCCCTTATCCGATGCGGTATTTACCATCGCATCTGA
TGACCTGTGGATCGAGAGTTTAGCGATCCAACAATTACACACCACGGCAAATTTACCCAACATGCAGCGCGTAGTGGGGA
TGCCAGATTTACATCCCGGACGCGGCTATCCGATTGGCGCAGCGTTCTTCTCTGTTGGTCGTTTTTATCCGGCACTGGTC
GGCAATGATATCGGCTGCGGTATGGCGCTATGGCAAACAGATATTCTCACTCGCAAATACAACGCCGATAAGTTTGAAAA
GCGATTATCAGATCTGGATGACGTTGCTGAAGAAAGCTGGCTGGAGGAAAACCTGCCGTCAGCATTTGCACAGCATCCGT
GGCGCAGCTCGCTTGGCTCTATCGGTGGCGGCAATCATTTCGCTGAACTGCAACAAGTTGATCAAATCATCAACGCTGAA
CTGTTTGCACTGGCAGGTCTGGATGCACAACATCTGCAACTGTTGGTTCATAGCGGCTCGCGGGGGGTGGGGCAGTCTAT
TTTACAGCGGCATATTGCCTCGTTCTCGCATCATGGTTTGCCTCAAGGCAGTGACGACGCGCTACGGTATATTGCGGAAC
ATGACGATGCGCTGGCGTTTGCGTGTATTAATCGCCAGATGATCGCTTTGCGCATAATGCAACAAGTTAAGGCCACGGGA
AGTCCGGTTCTGGATGTGGCGCATAACTTTGTTAGCGCGTGTCAAATCGGCGATCAACAGGGCTGGTTGCATCGTAAAGG
TGCCACGCCGGATGACAACGGTCTGGTGATTATTCCCGGTTCACGTGGTGATTACTCCTGGATTGTACAGCCTGTTGCGA
ACGAAAAAACGCTCCACTCGCTGGCGCATGGGGCAGGGCGTAAATGGGGGCGCACCGAGTGTAAAGGGCGTCTGGCAGCG
AAATACACGGCGACGCAACTCTCGCGTACTGAACTTGGCAGTCGGGTAATTTGTCGCGATAAACAACTCATCTTTGAAGA
AGCGCCACAAGCCTATAAATCGGCTGAAAGCGTGGTGCAATGTCTGGTGCAGGCCGGTTTAATTATTCCTGTCGCGCGGC
TGCGTCCGGTGCTAACGCTCAAAAACAGTGGAGGGAAAAAAGGATGA

Upstream 100 bases:

>100_bases
GGATTAATTCTTTTTTTCTTGCCCTGGATTCGTCTGCCATTTCCTGATTTTTTAATTGTTACTCTCAATAATTCAAGTCG
CAACACATGCAACTTGAAGT

Downstream 100 bases:

>100_bases
TCTTGCTACAACTCTCCTCAGCGCAGGGGCCGGAAGAATGTTGTCTCGCAGTGAAAAAGGCGCTGGACAGGCTAATTAAA
GAAGCTGCCCGACAAGACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MTSLFTEWYMGNYIRPLSDAVFTIASDDLWIESLAIQQLHTTANLPNMQRVVGMPDLHPGRGYPIGAAFFSVGRFYPALV
GNDIGCGMALWQTDILTRKYNADKFEKRLSDLDDVAEESWLEENLPSAFAQHPWRSSLGSIGGGNHFAELQQVDQIINAE
LFALAGLDAQHLQLLVHSGSRGVGQSILQRHIASFSHHGLPQGSDDALRYIAEHDDALAFACINRQMIALRIMQQVKATG
SPVLDVAHNFVSACQIGDQQGWLHRKGATPDDNGLVIIPGSRGDYSWIVQPVANEKTLHSLAHGAGRKWGRTECKGRLAA
KYTATQLSRTELGSRVICRDKQLIFEEAPQAYKSAESVVQCLVQAGLIIPVARLRPVLTLKNSGGKKG

Sequences:

>Translated_388_residues
MTSLFTEWYMGNYIRPLSDAVFTIASDDLWIESLAIQQLHTTANLPNMQRVVGMPDLHPGRGYPIGAAFFSVGRFYPALV
GNDIGCGMALWQTDILTRKYNADKFEKRLSDLDDVAEESWLEENLPSAFAQHPWRSSLGSIGGGNHFAELQQVDQIINAE
LFALAGLDAQHLQLLVHSGSRGVGQSILQRHIASFSHHGLPQGSDDALRYIAEHDDALAFACINRQMIALRIMQQVKATG
SPVLDVAHNFVSACQIGDQQGWLHRKGATPDDNGLVIIPGSRGDYSWIVQPVANEKTLHSLAHGAGRKWGRTECKGRLAA
KYTATQLSRTELGSRVICRDKQLIFEEAPQAYKSAESVVQCLVQAGLIIPVARLRPVLTLKNSGGKKG
>Mature_387_residues
TSLFTEWYMGNYIRPLSDAVFTIASDDLWIESLAIQQLHTTANLPNMQRVVGMPDLHPGRGYPIGAAFFSVGRFYPALVG
NDIGCGMALWQTDILTRKYNADKFEKRLSDLDDVAEESWLEENLPSAFAQHPWRSSLGSIGGGNHFAELQQVDQIINAEL
FALAGLDAQHLQLLVHSGSRGVGQSILQRHIASFSHHGLPQGSDDALRYIAEHDDALAFACINRQMIALRIMQQVKATGS
PVLDVAHNFVSACQIGDQQGWLHRKGATPDDNGLVIIPGSRGDYSWIVQPVANEKTLHSLAHGAGRKWGRTECKGRLAAK
YTATQLSRTELGSRVICRDKQLIFEEAPQAYKSAESVVQCLVQAGLIIPVARLRPVLTLKNSGGKKG

Specific function: Unknown

COG id: COG1690

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI7657015, Length=446, Percent_Identity=25.5605381165919, Blast_Score=100, Evalue=2e-21,
Organism=Escherichia coli, GI2367224, Length=419, Percent_Identity=27.4463007159904, Blast_Score=122, Evalue=5e-29,
Organism=Caenorhabditis elegans, GI17506665, Length=473, Percent_Identity=25.1585623678647, Blast_Score=108, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001233 [H]

Pfam domain/function: PF01139 UPF0027 [H]

EC number: NA

Molecular weight: Translated: 42589; Mature: 42458

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLFTEWYMGNYIRPLSDAVFTIASDDLWIESLAIQQLHTTANLPNMQRVVGMPDLHPG
CCCHHHHHHHCCCCCHHHHHHEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCC
RGYPIGAAFFSVGRFYPALVGNDIGCGMALWQTDILTRKYNADKFEKRLSDLDDVAEESW
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LEENLPSAFAQHPWRSSLGSIGGGNHFAELQQVDQIINAELFALAGLDAQHLQLLVHSGS
HHHCCHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
RGVGQSILQRHIASFSHHGLPQGSDDALRYIAEHDDALAFACINRQMIALRIMQQVKATG
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
SPVLDVAHNFVSACQIGDQQGWLHRKGATPDDNGLVIIPGSRGDYSWIVQPVANEKTLHS
CHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCEEEEECCCCCCCEEEECCCCHHHHHH
LAHGAGRKWGRTECKGRLAAKYTATQLSRTELGSRVICRDKQLIFEEAPQAYKSAESVVQ
HHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCEEECCCHHHHHHHCHHHHHHHHHHHH
CLVQAGLIIPVARLRPVLTLKNSGGKKG
HHHHCCHHHHHHHHCEEEEEECCCCCCC
>Mature Secondary Structure 
TSLFTEWYMGNYIRPLSDAVFTIASDDLWIESLAIQQLHTTANLPNMQRVVGMPDLHPG
CCHHHHHHHCCCCCHHHHHHEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCC
RGYPIGAAFFSVGRFYPALVGNDIGCGMALWQTDILTRKYNADKFEKRLSDLDDVAEESW
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LEENLPSAFAQHPWRSSLGSIGGGNHFAELQQVDQIINAELFALAGLDAQHLQLLVHSGS
HHHCCHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
RGVGQSILQRHIASFSHHGLPQGSDDALRYIAEHDDALAFACINRQMIALRIMQQVKATG
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
SPVLDVAHNFVSACQIGDQQGWLHRKGATPDDNGLVIIPGSRGDYSWIVQPVANEKTLHS
CHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCEEEEECCCCCCCEEEECCCCHHHHHH
LAHGAGRKWGRTECKGRLAAKYTATQLSRTELGSRVICRDKQLIFEEAPQAYKSAESVVQ
HHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCEEECCCHHHHHHHCHHHHHHHHHHHH
CLVQAGLIIPVARLRPVLTLKNSGGKKG
HHHHCCHHHHHHHHCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]