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The map label for this gene is oppA [H]

Identifier: 218692557

GI number: 218692557

Start: 4962552

End: 4962743

Strand: Direct

Name: oppA [H]

Synonym: ECED1_5020

Alternate gene names: 218692557

Gene position: 4962552-4962743 (Clockwise)

Preceding gene: 218692550

Following gene: 218692558

Centisome position: 95.26

GC content: 47.4

Gene sequence:

>192_bases
ATGAGCAATATCACCAGGAATAGTTTAGTTGTAGCAGGCGTTCTGGCTGCGCTTATGGCAGGGAATGTTGCGTTGGCATC
TGATGTGCCTACTGAAGTGACTCTAATAGAAAAACAAACGCTGGTACGTAACAACGGTGCAGAGGTTCAGTCAGAGCAGG
ACACTGACTGTCGTCTGAGAGGAAGTGGATAA

Upstream 100 bases:

>100_bases
GTAACACTTGTGTGCTATCCCGATATAACCTTAAGACTGGAGTTGCAACTGGAGCTCGTCGAAAATCAACGCCCAAATCC
TCGACAAATGGAGAAAGAGA

Downstream 100 bases:

>100_bases
AGCCGGAGCAAGAGAGCCAAATCATGATCGATTCGAATGCCAAACTATGATCGATTCAGATGCCATTTTGCAATTAATTT
AAAGTGTTATAAAAAAACAT

Product: Periplasmic oligopeptide-binding protein (fragment)

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 62

Protein sequence:

>63_residues
MSNITRNSLVVAGVLAALMAGNVALASDVPTEVTLIEKQTLVRNNGAEVQSEQDTDCRLRGSG

Sequences:

>Translated_63_residues
MSNITRNSLVVAGVLAALMAGNVALASDVPTEVTLIEKQTLVRNNGAEVQSEQDTDCRLRGSG
>Mature_62_residues
SNITRNSLVVAGVLAALMAGNVALASDVPTEVTLIEKQTLVRNNGAEVQSEQDTDCRLRGSG

Specific function: This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, it binds peptides up to five amino acids long with high affinity [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787495, Length=51, Percent_Identity=82.3529411764706, Blast_Score=86, Evalue=6e-19,

Paralogues:

None

Copy number: 760 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2360 Molecules/Cell In: Stationary-Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 6586; Mature: 6454

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNITRNSLVVAGVLAALMAGNVALASDVPTEVTLIEKQTLVRNNGAEVQSEQDTDCRLR
CCCCCCHHHHHHHHHHHHHHCCEEECCCCCCEEEEECCHHHHCCCCCCCCCCCCCCEEEE
GSG
CCC
>Mature Secondary Structure 
SNITRNSLVVAGVLAALMAGNVALASDVPTEVTLIEKQTLVRNNGAEVQSEQDTDCRLR
CCCCCHHHHHHHHHHHHHHCCEEECCCCCCEEEEECCHHHHCCCCCCCCCCCCCCEEEE
GSG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2187863; 9097039; 9278503; 2015910; 9298646; 9600841 [H]