Click here to switch to the map view.

The map label for this gene is 218692448

Identifier: 218692448

GI number: 218692448

Start: 4850429

End: 4850779

Strand: Direct

Name: 218692448

Synonym: ECED1_4892

Alternate gene names: NA

Gene position: 4850429-4850779 (Clockwise)

Preceding gene: 218692447

Following gene: 218692449

Centisome position: 93.11

GC content: 51.28

Gene sequence:

>351_bases
ATGATTTCACTCCCATCAGGTACCCGTATCTGGCTCGTTGCCGGCGTTACCGATATGCGTAAATCCTTCAACGGACTGGG
AGAACAGGTACAACATGTGCTGAATGATAATCCCTTCTCCGGCCACCTGTTTATCTTCCGTGGCCGACGGGGTGACACCG
TTAAAATTCTTTGGGCTGATGCTGATGGTCTGTGCCTGTTCACCAAACGCCTGGAAGAAGGCCAGTTTATCTGGCCTGCG
GTACGTGACGGCAAGGTATCCATTACCCGTTCGCAACTGGTAATGCTCCTCGATAAGCTGGACTGGCGTCAGCCAAAAAC
ATCCCGCCTTAACTCACTGACAATGTTGTAA

Upstream 100 bases:

>100_bases
GTTCCTGTAAGGTGGAGTTCCGTCACGGTAACATAACGCTGGAAAATCCATCGCCAGAGCTGCTCACGGTGCTGATCCGC
GAACTGAGCGGGAGGGGAAG

Downstream 100 bases:

>100_bases
AAAACTCCTGACCGCATTATAAAAACGGTCATGAGTCAGAAATACCTCATTCGCATCGCAGAGCTGGAAAGGTTGCTCTC
TGAGCAGGCTGAAGCCCTCC

Product: putative transposase ORF2, IS66 family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MISLPSGTRIWLVAGVTDMRKSFNGLGEQVQHVLNDNPFSGHLFIFRGRRGDTVKILWADADGLCLFTKRLEEGQFIWPA
VRDGKVSITRSQLVMLLDKLDWRQPKTSRLNSLTML

Sequences:

>Translated_116_residues
MISLPSGTRIWLVAGVTDMRKSFNGLGEQVQHVLNDNPFSGHLFIFRGRRGDTVKILWADADGLCLFTKRLEEGQFIWPA
VRDGKVSITRSQLVMLLDKLDWRQPKTSRLNSLTML
>Mature_116_residues
MISLPSGTRIWLVAGVTDMRKSFNGLGEQVQHVLNDNPFSGHLFIFRGRRGDTVKILWADADGLCLFTKRLEEGQFIWPA
VRDGKVSITRSQLVMLLDKLDWRQPKTSRLNSLTML

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 34 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008878 [H]

Pfam domain/function: PF05717 Transposase_34 [H]

EC number: NA

Molecular weight: Translated: 13215; Mature: 13215

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISLPSGTRIWLVAGVTDMRKSFNGLGEQVQHVLNDNPFSGHLFIFRGRRGDTVKILWAD
CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEC
ADGLCLFTKRLEEGQFIWPAVRDGKVSITRSQLVMLLDKLDWRQPKTSRLNSLTML
CCCEEEEEEECCCCCEEECEECCCEEEEHHHHHHHHHHHCCCCCCCCCCCCEEECC
>Mature Secondary Structure
MISLPSGTRIWLVAGVTDMRKSFNGLGEQVQHVLNDNPFSGHLFIFRGRRGDTVKILWAD
CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEC
ADGLCLFTKRLEEGQFIWPAVRDGKVSITRSQLVMLLDKLDWRQPKTSRLNSLTML
CCCEEEEEEECCCCCEEECEECCCEEEEHHHHHHHHHHHCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]