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The map label for this gene is yjbQ [H]

Identifier: 218692346

GI number: 218692346

Start: 4741555

End: 4741971

Strand: Direct

Name: yjbQ [H]

Synonym: ECED1_4781

Alternate gene names: 218692346

Gene position: 4741555-4741971 (Clockwise)

Preceding gene: 218692345

Following gene: 218692347

Centisome position: 91.02

GC content: 52.04

Gene sequence:

>417_bases
ATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCT
GGCTGATATGCCGCGCGTTAACATCGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGA
ACTGCGATCCCACCGTACGCCACGATATGGAGCGTTTTTTCCTCCGCGCCGTTCCCGATAACGGAAATTATGAGCATGAC
TATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGG
GCGTATTCAGACCGGCACCTGGCAAGGCATCTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGCATCATCGCGA
CACTACAAGGGGAGTGA

Upstream 100 bases:

>100_bases
GAGCGTAATACTCTCCCGAATACTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGA
GTTTTATCAAGGAGCAGCAC

Downstream 100 bases:

>100_bases
AAAATGACCATTTCGGAGTTGCTACAATATTGCATGGCAAAACCAGGCGCAGAACAGAGCGTGCATAACGACTGGAAAGC
GACGCAGATCAAAGTGGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MWYQKTLTLSAKSRGFHLVTDEILNQLADMPRVNIGLLHLLLQHTSASLTLNENCDPTVRHDMERFFLRAVPDNGNYEHD
YEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLGEHRIHGGSRRIIATLQGE

Sequences:

>Translated_138_residues
MWYQKTLTLSAKSRGFHLVTDEILNQLADMPRVNIGLLHLLLQHTSASLTLNENCDPTVRHDMERFFLRAVPDNGNYEHD
YEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLGEHRIHGGSRRIIATLQGE
>Mature_138_residues
MWYQKTLTLSAKSRGFHLVTDEILNQLADMPRVNIGLLHLLLQHTSASLTLNENCDPTVRHDMERFFLRAVPDNGNYEHD
YEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLGEHRIHGGSRRIIATLQGE

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=138, Percent_Identity=99.2753623188406, Blast_Score=286, Evalue=5e-79,
Organism=Drosophila melanogaster, GI221476594, Length=136, Percent_Identity=48.5294117647059, Blast_Score=152, Evalue=5e-38,
Organism=Drosophila melanogaster, GI221476589, Length=136, Percent_Identity=48.5294117647059, Blast_Score=151, Evalue=1e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 15626; Mature: 15626

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS01314 UPF0047

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWYQKTLTLSAKSRGFHLVTDEILNQLADMPRVNIGLLHLLLQHTSASLTLNENCDPTVR
CCCCEEEEEEECCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCCHHHH
HDMERFFLRAVPDNGNYEHDYEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLG
HHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCEECCCCCCEEEEC
EHRIHGGSRRIIATLQGE
CEEECCCCEEEEEEECCC
>Mature Secondary Structure
MWYQKTLTLSAKSRGFHLVTDEILNQLADMPRVNIGLLHLLLQHTSASLTLNENCDPTVR
CCCCEEEEEEECCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCCHHHH
HDMERFFLRAVPDNGNYEHDYEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLG
HHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCEECCCCCCEEEEC
EHRIHGGSRRIIATLQGE
CEEECCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]