| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is plsB
Identifier: 218692326
GI number: 218692326
Start: 4714170
End: 4716593
Strand: Reverse
Name: plsB
Synonym: ECED1_4756
Alternate gene names: 218692326
Gene position: 4716593-4714170 (Counterclockwise)
Preceding gene: 218692331
Following gene: 218692320
Centisome position: 90.54
GC content: 55.24
Gene sequence:
>2424_bases ATGTCCGGCTGGCCACGAATTTACTACAAATTACTGAATTTACCATTAAGCATCCTGGTAAAAAGCAAGTCTATTCCGGC GGATCCTGCCCCGGAACTGGGGCTGGATACCTCTCGTCCAATTATGTACGTTTTACCGTACAACTCGAAAGCTGACTTGC TGACGTTGCGCGCCCAGTGTCTGGCACATGACCTGCCTGACCCGTTAGAGCCGCTGGAAATCGACGGCACGCTACTGCCG CGCTATGTGTTCATTCACGGCGGGCCGCGTGTGTTCACCTATTACACGCCGAAAGAAGAGTCTATTAAGCTGTTCCACGA CTATCTCGATTTGCACCGCAGCAACCCAAATCTGGATGTGCAGATGGTGCCAGTATCGGTGATGTTTGGTCGCGCGCCGG GGCGTGAAAAAGGCGAAGTGAACCCGCCGCTGCGTATGCTTAACGGCGTACAGAAATTTTTCGCTGTACTGTGGCTCGGT CGCGACAGTTTTGTGCGTTTCTCGCCGTCAGTTTCGCTGCGCCGTATGGCGGATGAACACGGCACGGATAAAACTATCGC TCAGAAACTGGCGCGCGTAGCACGTATGCACTTTGCCCGTCAACGTCTGGCTGCCGTGGGTCCGCGTCTGCCTGCTCGTC AGGATCTGTTTAATAAGCTGCTCGCCTCCCGCGCCATTGCGAAAGCGGTAGAAGATGAAGCACGCAGCAAAAAAATCTCC CATGAAAAAGCGCAGCAGAACGCGATTGCGCTGATGGAAGAGATTGCGGCGAATTTCTCTTACGAGATGATCCGCCTGAC TGACCGCATTCTGGGCTTCACCTGGAACCGACTTTACCAGGGTATCAACGTCCATAACGCCGAGCGCGTTCGCCAGCTGG CCCACGACGGCCATGAGCTAGTGTATGTGCCTTGCCACCGCAGTCACATGGACTACCTGCTGCTTTCTTACGTGCTGTAT CACCAGGGGCTGGTGCCGCCGCATATCGCCGCCGGGATCAACCTGAACTTCTGGCCGGCCGGGCCGATTTTCCGCCGTCT GGGGGCGTTCTTTATTCGCCGTACGTTTAAAGGCAATAAACTTTATTCCACCGTTTTCCGTGAGTATCTCGGCGAACTGT TCAGCCGTGGTTATTCCGTCGAGTATTTCGTGGAAGGCGGTCGTTCCCGTACGGGGCGTTTGCTGGATCCGAAAACCGGT ACACTGTCGATGACCATTCAGGCGATGCTGCGTGGCGGCACTCGTCCGATTACGCTGATTCCGATCTATATCGGTTATGA GCACGTCATGGAAGTGGGTACTTACGCCAAAGAACTGCGCGGTGCGACGAAAGAGAAAGAGAGCCTGCCGCAGATGCTGC GTGGTTTAAGCAAGCTGCGTAATCTCGGTCAGGGTTACGTCAACTTCGGTGAACCAATGCCGTTGATGACCTACCTTAAC CAGCACGTACCAGACTGGCGTGAATCTATCGATCCCATCGAAGCGGTGCGTCCGGCCTGGTTAACGCCGACGGTCAATAA TATTGCTGCCGATCTGATGGTACGCATTAACAACGCAGGCGCGGCAAACGCCATGAACCTGTGCTGTACTGCGCTTCTGG CGTCACGTCAGCGCTCACTCACCCGCGAGCAGTTAACCGAGCAACTCAACTGCTACCTGGATCTGATGCGCAACGTACCT TACTCCACGGACTCTACCGTTCCTTCAGCCAGCGCCAGCGAGCTTATCGATCACGCGCTGCAAATGAACAAGTTTGAAGT TGAGAAAGACACTATCGGCGACATCATCATTCTGCCGCGCGAGCAAGCGGTGCTGATGACCTACTATCGCAACAACATTG CACATATGTTGGTGCTGCCTTCGCTGATGGCGGCAATTGTCACCCAGCATCGCCACATCTCCCGCGACGTATTGATGGAG CACGTCAATGTGCTTTACCCAATGCTGAAAGCGGAGCTGTTCCTGCGCTGGGATCGCGACGAGTTACCGGACGTTATTGA TGCGCTGGCAAATGAGATGCAACGTCAGGGGCTGATTACCCTGCAAGATGATGAGTTGCATATCAACCCGGCGCATTCTC GCACGCTACAGCTGCTGGCCGCAGGCGCGCGCGAAACGCTGCAACGTTATGCCATCACCTTCTGGCTGTTGAGTGCCAAC CCGTCGATCAACCGCGGTACGCTGGAGAAAGAGAGCCGCACCGTCGCGCAACGTCTCTCCGTGCTGCACGGTATCAACGC GCCGGAGTTCTTCGACAAGGCGGTGTTCAGTTCTCTGGTGCTGACACTGCGTGATGAAGGGTATATCAGCGATAGCGGCG ACGCCGAACCGGCAGAAACGATGAAGGTGTATCAGTTGCTGGCGGAGTTGATTACATCAGACGTGCGTTTGACGATTGAG AGTGCGACGCAGGGCGAAGGGTAA
Upstream 100 bases:
>100_bases AACGCCGCGCGAAACATGAGCGGATACCACAGAATTTCCCATGACTTTCTGCTATCCTTGCCGCGCATTTGCATTATTAA CCAGAGGCTTTACATCGTTT
Downstream 100 bases:
>100_bases TCAGTGAGAATTGCCGGATGCGACGCAAACGCCTTATTCGGCCTACCATGATCTGCAAATTCAATAAATTGCGATATGTT GTGTAGGCCTGAGAAGCGCA
Product: glycerol-3-phosphate acyltransferase
Products: NA
Alternate protein names: GPAT
Number of amino acids: Translated: 807; Mature: 806
Protein sequence:
>807_residues MSGWPRIYYKLLNLPLSILVKSKSIPADPAPELGLDTSRPIMYVLPYNSKADLLTLRAQCLAHDLPDPLEPLEIDGTLLP RYVFIHGGPRVFTYYTPKEESIKLFHDYLDLHRSNPNLDVQMVPVSVMFGRAPGREKGEVNPPLRMLNGVQKFFAVLWLG RDSFVRFSPSVSLRRMADEHGTDKTIAQKLARVARMHFARQRLAAVGPRLPARQDLFNKLLASRAIAKAVEDEARSKKIS HEKAQQNAIALMEEIAANFSYEMIRLTDRILGFTWNRLYQGINVHNAERVRQLAHDGHELVYVPCHRSHMDYLLLSYVLY HQGLVPPHIAAGINLNFWPAGPIFRRLGAFFIRRTFKGNKLYSTVFREYLGELFSRGYSVEYFVEGGRSRTGRLLDPKTG TLSMTIQAMLRGGTRPITLIPIYIGYEHVMEVGTYAKELRGATKEKESLPQMLRGLSKLRNLGQGYVNFGEPMPLMTYLN QHVPDWRESIDPIEAVRPAWLTPTVNNIAADLMVRINNAGAANAMNLCCTALLASRQRSLTREQLTEQLNCYLDLMRNVP YSTDSTVPSASASELIDHALQMNKFEVEKDTIGDIIILPREQAVLMTYYRNNIAHMLVLPSLMAAIVTQHRHISRDVLME HVNVLYPMLKAELFLRWDRDELPDVIDALANEMQRQGLITLQDDELHINPAHSRTLQLLAAGARETLQRYAITFWLLSAN PSINRGTLEKESRTVAQRLSVLHGINAPEFFDKAVFSSLVLTLRDEGYISDSGDAEPAETMKVYQLLAELITSDVRLTIE SATQGEG
Sequences:
>Translated_807_residues MSGWPRIYYKLLNLPLSILVKSKSIPADPAPELGLDTSRPIMYVLPYNSKADLLTLRAQCLAHDLPDPLEPLEIDGTLLP RYVFIHGGPRVFTYYTPKEESIKLFHDYLDLHRSNPNLDVQMVPVSVMFGRAPGREKGEVNPPLRMLNGVQKFFAVLWLG RDSFVRFSPSVSLRRMADEHGTDKTIAQKLARVARMHFARQRLAAVGPRLPARQDLFNKLLASRAIAKAVEDEARSKKIS HEKAQQNAIALMEEIAANFSYEMIRLTDRILGFTWNRLYQGINVHNAERVRQLAHDGHELVYVPCHRSHMDYLLLSYVLY HQGLVPPHIAAGINLNFWPAGPIFRRLGAFFIRRTFKGNKLYSTVFREYLGELFSRGYSVEYFVEGGRSRTGRLLDPKTG TLSMTIQAMLRGGTRPITLIPIYIGYEHVMEVGTYAKELRGATKEKESLPQMLRGLSKLRNLGQGYVNFGEPMPLMTYLN QHVPDWRESIDPIEAVRPAWLTPTVNNIAADLMVRINNAGAANAMNLCCTALLASRQRSLTREQLTEQLNCYLDLMRNVP YSTDSTVPSASASELIDHALQMNKFEVEKDTIGDIIILPREQAVLMTYYRNNIAHMLVLPSLMAAIVTQHRHISRDVLME HVNVLYPMLKAELFLRWDRDELPDVIDALANEMQRQGLITLQDDELHINPAHSRTLQLLAAGARETLQRYAITFWLLSAN PSINRGTLEKESRTVAQRLSVLHGINAPEFFDKAVFSSLVLTLRDEGYISDSGDAEPAETMKVYQLLAELITSDVRLTIE SATQGEG >Mature_806_residues SGWPRIYYKLLNLPLSILVKSKSIPADPAPELGLDTSRPIMYVLPYNSKADLLTLRAQCLAHDLPDPLEPLEIDGTLLPR YVFIHGGPRVFTYYTPKEESIKLFHDYLDLHRSNPNLDVQMVPVSVMFGRAPGREKGEVNPPLRMLNGVQKFFAVLWLGR DSFVRFSPSVSLRRMADEHGTDKTIAQKLARVARMHFARQRLAAVGPRLPARQDLFNKLLASRAIAKAVEDEARSKKISH EKAQQNAIALMEEIAANFSYEMIRLTDRILGFTWNRLYQGINVHNAERVRQLAHDGHELVYVPCHRSHMDYLLLSYVLYH QGLVPPHIAAGINLNFWPAGPIFRRLGAFFIRRTFKGNKLYSTVFREYLGELFSRGYSVEYFVEGGRSRTGRLLDPKTGT LSMTIQAMLRGGTRPITLIPIYIGYEHVMEVGTYAKELRGATKEKESLPQMLRGLSKLRNLGQGYVNFGEPMPLMTYLNQ HVPDWRESIDPIEAVRPAWLTPTVNNIAADLMVRINNAGAANAMNLCCTALLASRQRSLTREQLTEQLNCYLDLMRNVPY STDSTVPSASASELIDHALQMNKFEVEKDTIGDIIILPREQAVLMTYYRNNIAHMLVLPSLMAAIVTQHRHISRDVLMEH VNVLYPMLKAELFLRWDRDELPDVIDALANEMQRQGLITLQDDELHINPAHSRTLQLLAAGARETLQRYAITFWLLSANP SINRGTLEKESRTVAQRLSVLHGINAPEFFDKAVFSSLVLTLRDEGYISDSGDAEPAETMKVYQLLAELITSDVRLTIES ATQGEG
Specific function: De novo phospholipid biosynthesis; first step. [C]
COG id: COG2937
COG function: function code I; Glycerol-3-phosphate O-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPAT/DAPAT family
Homologues:
Organism=Homo sapiens, GI7657134, Length=435, Percent_Identity=27.816091954023, Blast_Score=150, Evalue=5e-36, Organism=Homo sapiens, GI190358539, Length=272, Percent_Identity=33.4558823529412, Blast_Score=133, Evalue=6e-31, Organism=Escherichia coli, GI87082362, Length=807, Percent_Identity=100, Blast_Score=1665, Evalue=0.0, Organism=Caenorhabditis elegans, GI71988723, Length=278, Percent_Identity=31.6546762589928, Blast_Score=144, Evalue=2e-34, Organism=Caenorhabditis elegans, GI25147672, Length=279, Percent_Identity=30.1075268817204, Blast_Score=140, Evalue=4e-33, Organism=Caenorhabditis elegans, GI71988728, Length=190, Percent_Identity=37.8947368421053, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI17864692, Length=270, Percent_Identity=30.7407407407407, Blast_Score=144, Evalue=3e-34, Organism=Drosophila melanogaster, GI24650752, Length=499, Percent_Identity=25.4509018036072, Blast_Score=144, Evalue=3e-34, Organism=Drosophila melanogaster, GI21357731, Length=499, Percent_Identity=25.4509018036072, Blast_Score=144, Evalue=3e-34, Organism=Drosophila melanogaster, GI24650754, Length=499, Percent_Identity=25.4509018036072, Blast_Score=144, Evalue=3e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PLSB_ECOK1 (A1AIL8)
Other databases:
- EMBL: CP000468 - RefSeq: YP_859632.1 - ProteinModelPortal: A1AIL8 - STRING: A1AIL8 - EnsemblBacteria: EBESCT00000035964 - GeneID: 4493032 - GenomeReviews: CP000468_GR - KEGG: ecv:APECO1_2428 - eggNOG: COG2937 - GeneTree: EBGT00050000010697 - HOGENOM: HBG296590 - OMA: VIYVPCH - ProtClustDB: PRK04974 - BioCyc: ECOL405955:APECO1_2428-MONOMER - HAMAP: MF_00393 - InterPro: IPR002123 - InterPro: IPR022284 - SMART: SM00563 - TIGRFAMs: TIGR03703
Pfam domain/function: PF01553 Acyltransferase
EC number: =2.3.1.15
Molecular weight: Translated: 91383; Mature: 91252
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGWPRIYYKLLNLPLSILVKSKSIPADPAPELGLDTSRPIMYVLPYNSKADLLTLRAQC CCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHH LAHDLPDPLEPLEIDGTLLPRYVFIHGGPRVFTYYTPKEESIKLFHDYLDLHRSNPNLDV HHCCCCCCCCCCCCCCEEECEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEE QMVPVSVMFGRAPGREKGEVNPPLRMLNGVQKFFAVLWLGRDSFVRFSPSVSLRRMADEH EEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHC GTDKTIAQKLARVARMHFARQRLAAVGPRLPARQDLFNKLLASRAIAKAVEDEARSKKIS CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HEKAQQNAIALMEEIAANFSYEMIRLTDRILGFTWNRLYQGINVHNAERVRQLAHDGHEL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEE VYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGINLNFWPAGPIFRRLGAFFIRRTFKGNK EEECCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCH LYSTVFREYLGELFSRGYSVEYFVEGGRSRTGRLLDPKTGTLSMTIQAMLRGGTRPITLI HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEECCCCCHHHHHHHHHHCCCCCCEEEE PIYIGYEHVMEVGTYAKELRGATKEKESLPQMLRGLSKLRNLGQGYVNFGEPMPLMTYLN EEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH QHVPDWRESIDPIEAVRPAWLTPTVNNIAADLMVRINNAGAANAMNLCCTALLASRQRSL HCCCCHHHCCCHHHHCCCCCCCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHH TREQLTEQLNCYLDLMRNVPYSTDSTVPSASASELIDHALQMNKFEVEKDTIGDIIILPR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCEEEECC EQAVLMTYYRNNIAHMLVLPSLMAAIVTQHRHISRDVLMEHVNVLYPMLKAELFLRWDRD CCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHH ELPDVIDALANEMQRQGLITLQDDELHINPAHSRTLQLLAAGARETLQRYAITFWLLSAN HHHHHHHHHHHHHHHCCCEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEEECC PSINRGTLEKESRTVAQRLSVLHGINAPEFFDKAVFSSLVLTLRDEGYISDSGDAEPAET CCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH MKVYQLLAELITSDVRLTIESATQGEG HHHHHHHHHHHCCCCEEEEECCCCCCC >Mature Secondary Structure SGWPRIYYKLLNLPLSILVKSKSIPADPAPELGLDTSRPIMYVLPYNSKADLLTLRAQC CCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHH LAHDLPDPLEPLEIDGTLLPRYVFIHGGPRVFTYYTPKEESIKLFHDYLDLHRSNPNLDV HHCCCCCCCCCCCCCCEEECEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEE QMVPVSVMFGRAPGREKGEVNPPLRMLNGVQKFFAVLWLGRDSFVRFSPSVSLRRMADEH EEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHC GTDKTIAQKLARVARMHFARQRLAAVGPRLPARQDLFNKLLASRAIAKAVEDEARSKKIS CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HEKAQQNAIALMEEIAANFSYEMIRLTDRILGFTWNRLYQGINVHNAERVRQLAHDGHEL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEE VYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGINLNFWPAGPIFRRLGAFFIRRTFKGNK EEECCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCH LYSTVFREYLGELFSRGYSVEYFVEGGRSRTGRLLDPKTGTLSMTIQAMLRGGTRPITLI HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEECCCCCHHHHHHHHHHCCCCCCEEEE PIYIGYEHVMEVGTYAKELRGATKEKESLPQMLRGLSKLRNLGQGYVNFGEPMPLMTYLN EEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH QHVPDWRESIDPIEAVRPAWLTPTVNNIAADLMVRINNAGAANAMNLCCTALLASRQRSL HCCCCHHHCCCHHHHCCCCCCCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHH TREQLTEQLNCYLDLMRNVPYSTDSTVPSASASELIDHALQMNKFEVEKDTIGDIIILPR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCEEEECC EQAVLMTYYRNNIAHMLVLPSLMAAIVTQHRHISRDVLMEHVNVLYPMLKAELFLRWDRD CCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHH ELPDVIDALANEMQRQGLITLQDDELHINPAHSRTLQLLAAGARETLQRYAITFWLLSAN HHHHHHHHHHHHHHHCCCEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEEECC PSINRGTLEKESRTVAQRLSVLHGINAPEFFDKAVFSSLVLTLRDEGYISDSGDAEPAET CCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH MKVYQLLAELITSDVRLTIESATQGEG HHHHHHHHHHHCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA